DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and psmb11a

DIOPT Version :10

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001007179.1 Gene:psmb11a / 446135 ZFINID:ZDB-GENE-040724-32 Length:375 Species:Danio rerio


Alignment Length:319 Identity:72/319 - (22%)
Similarity:121/319 - (37%) Gaps:86/319 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AGFNF-----DNCKRN--ATLLNRGFKP---PTTTKTGTTIVGIIYKDGVILGADTRATEGPIVS 66
            :.|||     .:|::|  :||.:....|   |.....|||.:|.|::||||..|||||:...:|.
Zfish    40 SSFNFHLPAQQSCRKNTASTLFSSTLSPHEQPFHLSHGTTTLGFIFQDGVIAAADTRASCKGLVC 104

  Fly    67 DKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQMLFRYQG 131
            .....||..:..::....:|:.||..:...:::.::.|::|:....:.:..|..:|..||..::|
Zfish   105 CPITHKIMPIHSHLVVNTSGSGADCMLWERILTREMRLYQLRHRTRLSINGAAKLLSTMLHPFKG 169

  Fly   132 -HISAALVLGGVD--------KT------------------------------------------ 145
             ::..|..|.|.|        ||                                          
Zfish   170 TNVCVAATLCGWDGEESQIQWKTSMGTVNVNESMAQDSTLSAISDESALGSEKRASISEQEEILK 234

  Fly   146 ---------------GPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVR 195
                           ||.:..:...|........::||||..|..|.:..|:..::.:|...|.|
Zfish   235 DVPDQQNRSTFGGRFGPRVCYVCSDGLQLNGEIISVGSGSPYAYAVLDDGWRWGMTVDEAVGLAR 299

  Fly   196 DAIASGVFNDLGSGSNIDLCVI-RKG---------SVEYLRNYELANKKGKRQLDYRFK 244
            :|:......|..||:|:||..| .:|         ..||.|..|...:|.|.:.:.|.|
Zfish   300 EAVFRATHWDAYSGNNVDLFYITARGWRRREREDLKEEYYREREREREKIKEREEERQK 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 55/261 (21%)
Pr_beta_C 231..264 CDD:463597 4/14 (29%)
psmb11aNP_001007179.1 proteasome_beta_type_5 78..330 CDD:239730 54/251 (22%)

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