DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Prosbeta2 and psma6b

DIOPT Version :9

Sequence 1:	NP_524076.2	Gene:	Prosbeta2 / 39628	FlyBaseID:	FBgn0023174	Length:	272	Species:	Drosophila melanogaster
Sequence 2:	NP_001002589.1	Gene:	psma6b / 436862	ZFINID:	ZDB-GENE-040718-329	Length:	246	Species:	Danio rerio

Alignment Length:	181	Identity:	38/181 - (20%)
Similarity:	59/181 - (32%)	Gaps:	46/181 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 LNRGFKPPTTTKTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAAD 90
            :|:|         |.|.|.:..||..|:....:..: .::.......:..:.:||.|..:|..||
Zfish    32 INQG---------GLTSVAVRGKDCAIVVTQKKVPD-KLLDSSTVTHLFRITENIGCVMSGMTAD 86

  Fly    91 TEMTTDLISSQLELHRLQTDREVRVVAANTMLK-------QMLFRYQGHIS-------------- 134
            :              |.|..| .|..|||...|       .||.:....||
Zfish    87 S--------------RSQVQR-ARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGC 136

  Fly   135 AALVLGGVDKTGPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDL 185
            ..:|:|..::.||.:|...|.|..........|.....|.:..|.:.|..|
Zfish   137 CMIVIGLDEELGPQVYKCDPAGYYCGFKATAAGVKQTEATSFLEKKVKKKL 187

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Prosbeta2	NP_524076.2	PRE1	42..232	CDD:223711	34/165 (21%)
		proteasome_beta_type_7	42..228	CDD:239732	34/165 (21%)
		Pr_beta_C	232..264	CDD:289249
psma6b	NP_001002589.1	PRE1	7..245	CDD:223711	38/181 (21%)
psma6b	NP_001002589.1	proteasome_alpha_type_6	8..220	CDD:239723	38/181 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0638
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900