DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and psma5

DIOPT Version :9

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_991271.1 Gene:psma5 / 403011 ZFINID:ZDB-GENE-040625-96 Length:241 Species:Danio rerio


Alignment Length:209 Identity:48/209 - (22%)
Similarity:90/209 - (43%) Gaps:24/209 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQ 101
            |.|:|.:||...:||.|..:.|.| .|::...:..||..:..:|.|..:|..||.:...|....:
Zfish    32 KLGSTAIGIQTSEGVCLAVEKRIT-SPLMEPSSIEKIVEIDSHIGCAMSGLIADAKTLIDKARVE 95

  Fly   102 LELHRLQTDREVRVVAANTMLKQMLFRY------QGHIS----AALVLGGVDKTGPHIYSIHPHG 156
            .:.|....:..:.|.:....:..:..::      .|.:|    .||:.||||:.||.:|.:.|.|
Zfish    96 TQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLYHMDPSG 160

  Fly   157 SSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASG------VFNDLGSGSNIDLC 215
            :..:.....:||.|..|.:..:..:...::       ::|||.|.      |..:..:.:||:|.
Zfish   161 TFVQCDARAIGSASEGAQSSLQEVYHKSMT-------LKDAIKSSLTILKQVMEEKLNATNIELA 218

  Fly   216 VIRKGSVEYLRNYE 229
            .:..|...::...|
Zfish   219 TVEPGKTFHMYTKE 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 PRE1 42..232 CDD:223711 45/204 (22%)
proteasome_beta_type_7 42..228 CDD:239732 44/201 (22%)
Pr_beta_C 232..264 CDD:289249
psma5NP_991271.1 proteasome_alpha_type_5 8..220 CDD:239722 46/195 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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