DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and Prosbeta6

DIOPT Version :10

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster


Alignment Length:215 Identity:51/215 - (23%)
Similarity:88/215 - (40%) Gaps:24/215 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GFKPPTTT---KTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAAD 90
            |.|.|..:   ..|.:||.|...|..::.||||.:.|..:..:..:|:..|:.......||..||
  Fly    16 GMKHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWAD 80

  Fly    91 TEMTTDLISSQLELH-----RLQTDREVRVVAANTMLKQMLFRYQGHISAALVLGGVDKTGPH-I 149
            |...|..|..:::.:     |..|...|..:.:..|..:..|.|  ::|.  :|.|:|..|.. :
  Fly    81 TLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPY--YVSN--ILAGIDNEGKGVV 141

  Fly   150 YSIHPHGSSDKLPYATMGSGSLAAMTVFESRW-----------KPDLSEEEGKKLVRDAIASGVF 203
            ||..|.|..:|..|...|:.......|.:::.           |..|::|....:..|...|...
  Fly   142 YSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAE 206

  Fly   204 NDLGSGSNIDLCVIRKGSVE 223
            .|:.:|.::.:.:|.|..:|
  Fly   207 RDIYTGDSVLINIITKDGIE 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 47/199 (24%)
Pr_beta_C 231..264 CDD:463597
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 48/209 (23%)
Blue background indicates that the domain is not in the aligned region.

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