DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and psmb5

DIOPT Version :10

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_571226.1 Gene:psmb5 / 30387 ZFINID:ZDB-GENE-990415-215 Length:269 Species:Danio rerio


Alignment Length:251 Identity:68/251 - (27%)
Similarity:115/251 - (45%) Gaps:29/251 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GFNFDNCKRNATLLNRGFKPPTTTKT---------------GTTIVGIIYKDGVILGADTRATEG 62
            |.|..|....|.|   |..|....||               |||.:...::.|||:..|:|||.|
Zfish    27 GLNQTNLGFGAAL---GDSPNFAVKTLGEDDEPERKIEFLHGTTTLAFKFQHGVIVAVDSRATAG 88

  Fly    63 PIVSDKNCAKIHYLAKNIYCCG--AGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQM 125
            ..::.:...|:  :..|.|..|  ||.|||......|::.|..::.|:....:.|.||:.:|..|
Zfish    89 AYIASQTVKKV--IEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANM 151

  Fly   126 LFRYQG-HISAALVLGGVDKTGPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEE 189
            :::|:| .:|...::.|.||.||.:|.:...|:........:||||:.|..|.:|..:.||:.:|
Zfish   152 VYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGGLFAVGSGSMYAYGVVDSGLRYDLTIDE 216

  Fly   190 GKKLVRDAIASGVFNDLGSGSNIDLCVIRKGSVEYLRNYELANKKGKRQLDYRFKT 245
            ...|.|.||....:.|..||..::|..:      :...:|..:::...||..::::
Zfish   217 ACDLGRRAIYQATYRDAYSGGQVNLYRV------HSEGWERVSQEDVLQLHQKYQS 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 53/188 (28%)
Pr_beta_C 231..264 CDD:463597 2/15 (13%)
psmb5NP_571226.1 proteasome_beta_type_5 66..253 CDD:239730 56/194 (29%)

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