DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and psmb5

DIOPT Version :9

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_571226.1 Gene:psmb5 / 30387 ZFINID:ZDB-GENE-990415-215 Length:269 Species:Danio rerio


Alignment Length:251 Identity:68/251 - (27%)
Similarity:115/251 - (45%) Gaps:29/251 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GFNFDNCKRNATLLNRGFKPPTTTKT---------------GTTIVGIIYKDGVILGADTRATEG 62
            |.|..|....|.|   |..|....||               |||.:...::.|||:..|:|||.|
Zfish    27 GLNQTNLGFGAAL---GDSPNFAVKTLGEDDEPERKIEFLHGTTTLAFKFQHGVIVAVDSRATAG 88

  Fly    63 PIVSDKNCAKIHYLAKNIYCCG--AGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQM 125
            ..::.:...|:  :..|.|..|  ||.|||......|::.|..::.|:....:.|.||:.:|..|
Zfish    89 AYIASQTVKKV--IEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANM 151

  Fly   126 LFRYQG-HISAALVLGGVDKTGPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEE 189
            :::|:| .:|...::.|.||.||.:|.:...|:........:||||:.|..|.:|..:.||:.:|
Zfish   152 VYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGGLFAVGSGSMYAYGVVDSGLRYDLTIDE 216

  Fly   190 GKKLVRDAIASGVFNDLGSGSNIDLCVIRKGSVEYLRNYELANKKGKRQLDYRFKT 245
            ...|.|.||....:.|..||..::|..:      :...:|..:::...||..::::
Zfish   217 ACDLGRRAIYQATYRDAYSGGQVNLYRV------HSEGWERVSQEDVLQLHQKYQS 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 PRE1 42..232 CDD:223711 54/192 (28%)
proteasome_beta_type_7 42..228 CDD:239732 53/188 (28%)
Pr_beta_C 232..264 CDD:289249 2/14 (14%)
psmb5NP_571226.1 PTZ00488 44..268 CDD:185666 61/231 (26%)
proteasome_beta_type_5 66..253 CDD:239730 56/194 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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