DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and Psma5

DIOPT Version :10

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_063137749.1 Gene:Psma5 / 29672 RGDID:61848 Length:249 Species:Rattus norvegicus


Alignment Length:190 Identity:44/190 - (23%)
Similarity:85/190 - (44%) Gaps:16/190 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQ 101
            |.|:|.:||...:||.|..:.|.| .|::...:..||..:..:|.|..:|..||.:...|....:
  Rat    32 KLGSTAIGIQTSEGVCLAVEKRIT-SPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVE 95

  Fly   102 LELHRLQTDREVRVVAANTMLKQMLFRY------QGHIS----AALVLGGVDKTGPHIYSIHPHG 156
            .:.|....:..:.|.:....:..:..::      .|.:|    .||:.||||:.||.::.:.|.|
  Rat    96 TQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSG 160

  Fly   157 SSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKK--LVRDAIASGVFNDLGSGSNIDL 214
            :..:.....:||.|..|.:..:..:...::.:|..|  |:   |...|..:..:.:||::
  Rat   161 TFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLI---ILKQVMEEKLNATNIEV 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 41/185 (22%)
Pr_beta_C 231..264 CDD:463597
Psma5XP_063137749.1 None
Blue background indicates that the domain is not in the aligned region.

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