DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and Psmb10

DIOPT Version :10

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001020808.1 Gene:Psmb10 / 291983 RGDID:1307428 Length:273 Species:Rattus norvegicus


Alignment Length:265 Identity:128/265 - (48%)
Similarity:182/265 - (68%) Gaps:5/265 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RAGFNFDNCKRNATL--LNRGFKPPTTTKTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKI 73
            |.||:|:||:|||:|  :..|.:.|...||||||.|::::||||||||||||...:|:||:|.||
  Rat     9 RGGFSFENCQRNASLEHVLPGLRVPLARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKI 73

  Fly    74 HYLAKNIYCCGAGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQMLFRYQGHISAALV 138
            |::|..|||||||.||||||||.:.:|::|||.|.|.||.||.....:|:|.|||||||:.|:|:
  Rat    74 HFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLI 138

  Fly   139 LGGVDKTGPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASGVF 203
            :||||..||.:||:|||||..:||:..:|||..||:.:.|.|::|:::.|..::|:.:||.:|:.
  Rat   139 VGGVDLNGPQLYSVHPHGSYSRLPFTALGSGQDAAVALLEDRFQPNMTLEAAQELLVEAITAGIL 203

  Fly   204 NDLGSGSNIDLCVIRKGSVEYLRNYELANKKGKRQLDYRFKTGTSTVLHTNIKDL---LVTERVQ 265
            .|||||.::|.|||..|..:..|......:..:|...|||..||:.|....::.|   |:.|.||
  Rat   204 GDLGSGGSVDACVITAGGAKLQRALSSPIEPVQRAGQYRFAPGTTPVQTQEVRALTLELLEETVQ 268

  Fly   266 AVPME 270
            |:.:|
  Rat   269 AMEVE 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 97/185 (52%)
Pr_beta_C 231..264 CDD:463597 10/35 (29%)
Psmb10NP_001020808.1 proteasome_beta_type_7 40..226 CDD:239732 98/185 (53%)
Pr_beta_C 231..267 CDD:463597 10/35 (29%)

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