DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and Psma7

DIOPT Version :10

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_036099.1 Gene:Psma7 / 26444 MGIID:1347070 Length:248 Species:Mus musculus


Alignment Length:221 Identity:59/221 - (26%)
Similarity:93/221 - (42%) Gaps:28/221 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQ 101
            |.|:|.||:..||.|:||.:.::. ..:..::...||..|..|:....||..||..:..:....:
Mouse    27 KKGSTAVGVRGKDIVVLGVEKKSV-AKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVE 90

  Fly   102 LELHRLQTDREV------RVVAANTMLKQMLFRYQGH----ISAALVLGGVDKTG-PHIYSIHPH 155
            .:.|||..:..|      |.:|:   |||...:..|.    |||.:|  |.|..| |.:|...|.
Mouse    91 CQSHRLTVEDPVTVEYITRYIAS---LKQRYTQSNGRRPFGISALIV--GFDFDGTPRLYQTDPS 150

  Fly   156 GSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGK--KLVRDAIASGVFNDLGSGSNIDLCVIR 218
            |:........:|.|:.:.....|..:..|..|.:..  |||..|:...|   ...|.||:|.|:|
Mouse   151 GTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVV---QSGGKNIELAVMR 212

  Fly   219 KG------SVEYLRNYELANKKGKRQ 238
            :.      :.|.:..|....:|.|.:
Mouse   213 RDQPLKILNPEEIEKYVAEIEKEKEE 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 53/204 (26%)
Pr_beta_C 231..264 CDD:463597 2/8 (25%)
Psma7NP_036099.1 proteasome_alpha_type_7 3..211 CDD:239724 53/192 (28%)

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