DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta2 and Psma7

DIOPT Version :9

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_036099.1 Gene:Psma7 / 26444 MGIID:1347070 Length:248 Species:Mus musculus


Alignment Length:221 Identity:59/221 - (26%)
Similarity:93/221 - (42%) Gaps:28/221 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQ 101
            |.|:|.||:..||.|:||.:.::. ..:..::...||..|..|:....||..||..:..:....:
Mouse    27 KKGSTAVGVRGKDIVVLGVEKKSV-AKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVE 90

  Fly   102 LELHRLQTDREV------RVVAANTMLKQMLFRYQGH----ISAALVLGGVDKTG-PHIYSIHPH 155
            .:.|||..:..|      |.:|:   |||...:..|.    |||.:|  |.|..| |.:|...|.
Mouse    91 CQSHRLTVEDPVTVEYITRYIAS---LKQRYTQSNGRRPFGISALIV--GFDFDGTPRLYQTDPS 150

  Fly   156 GSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGK--KLVRDAIASGVFNDLGSGSNIDLCVIR 218
            |:........:|.|:.:.....|..:..|..|.:..  |||..|:...|   ...|.||:|.|:|
Mouse   151 GTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVV---QSGGKNIELAVMR 212

  Fly   219 KG------SVEYLRNYELANKKGKRQ 238
            :.      :.|.:..|....:|.|.:
Mouse   213 RDQPLKILNPEEIEKYVAEIEKEKEE 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 PRE1 42..232 CDD:223711 54/208 (26%)
proteasome_beta_type_7 42..228 CDD:239732 53/204 (26%)
Pr_beta_C 232..264 CDD:289249 2/7 (29%)
Psma7NP_036099.1 proteasome_alpha_type_7 3..211 CDD:239724 53/192 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.