DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and Psma5

DIOPT Version :9

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_036097.1 Gene:Psma5 / 26442 MGIID:1347009 Length:241 Species:Mus musculus


Alignment Length:210 Identity:48/210 - (22%)
Similarity:94/210 - (44%) Gaps:21/210 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQ 101
            |.|:|.:||...:||.|..:.|.| .|::...:..||..:..:|.|..:|..||.:...|....:
Mouse    32 KLGSTAIGIQTSEGVCLAVEKRIT-SPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVE 95

  Fly   102 LELHRLQTDREVRVVAANTMLKQMLFRY------QGHIS----AALVLGGVDKTGPHIYSIHPHG 156
            .:.|....:..:.|.:....:..:..::      .|.:|    .||:.||||:.||.::.:.|.|
Mouse    96 TQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSG 160

  Fly   157 SSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKK--LVRDAIASGVFNDLGSGSNIDLCVIRK 219
            :..:.....:||.|..|.:..:..:...::.:|..|  |:   |...|..:..:.:||:|..::.
Mouse   161 TFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLI---ILKQVMEEKLNATNIELATVQP 222

  Fly   220 GSVEYLRNYELANKK 234
            |     :|:.:..|:
Mouse   223 G-----QNFHMFTKE 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 PRE1 42..232 CDD:223711 44/201 (22%)
proteasome_beta_type_7 42..228 CDD:239732 43/197 (22%)
Pr_beta_C 232..264 CDD:289249 1/3 (33%)
Psma5NP_036097.1 proteasome_alpha_type_5 8..220 CDD:239722 45/191 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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