DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and pup1

DIOPT Version :9

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_594544.1 Gene:pup1 / 2541805 PomBaseID:SPAC23D3.07 Length:267 Species:Schizosaccharomyces pombe


Alignment Length:261 Identity:138/261 - (52%)
Similarity:184/261 - (70%) Gaps:0/261 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RAGFNFDNCKRNATLLNRGFKPPTTTKTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHY 75
            |.||:|:..:||..|..:||..|..|.|||||||:|.||.::||||||||.|||::||||.|:|.
pombe     7 RKGFDFEYYQRNLLLQEKGFPTPKATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHL 71

  Fly    76 LAKNIYCCGAGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQMLFRYQGHISAALVLG 140
            ::.||:|.|||||||||..|.:|||.:|||.|.|:|:.|||.|.|||||.||||||||.|.||||
pombe    72 ISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYLVLG 136

  Fly   141 GVDKTGPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASGVFND 205
            |.|..|||:::|..|||||||||..:|||||||::|.|::::|||...|..:||::||.:|:|||
pombe   137 GYDCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFND 201

  Fly   206 LGSGSNIDLCVIRKGSVEYLRNYELANKKGKRQLDYRFKTGTSTVLHTNIKDLLVTERVQAVPME 270
            ||||||.||.||.:......|.|...|::..:|..|.:..||:.||..:|...:..:.:..:.::
pombe   202 LGSGSNCDLVVIDEEKATPYRGYSKPNERATKQSKYTYDRGTTAVLKEDIYKFVTVQDLDEMQVD 266

  Fly   271 I 271
            :
pombe   267 V 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 PRE1 42..232 CDD:223711 115/189 (61%)
proteasome_beta_type_7 42..228 CDD:239732 114/185 (62%)
Pr_beta_C 232..264 CDD:289249 8/31 (26%)
pup1NP_594544.1 PRE1 10..237 CDD:223711 130/226 (58%)
proteasome_beta_type_7 36..224 CDD:239732 116/187 (62%)
Pr_beta_C 228..>253 CDD:289249 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 245 1.000 Domainoid score I424
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2093
Inparanoid 1 1.050 284 1.000 Inparanoid score I652
OMA 1 1.010 - - QHG53608
OrthoFinder 1 1.000 - - FOG0001188
OrthoInspector 1 1.000 - - otm46978
orthoMCL 1 0.900 - - OOG6_101382
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1015
SonicParanoid 1 1.000 - - X1020
TreeFam 1 0.960 - -
1413.860

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