DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and Psmb5

DIOPT Version :9

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_035316.1 Gene:Psmb5 / 19173 MGIID:1194513 Length:264 Species:Mus musculus


Alignment Length:184 Identity:58/184 - (31%)
Similarity:95/184 - (51%) Gaps:5/184 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG--AGTAADTEMTTDLISSQ 101
            |||.:...:..|||:.||:|||.|..::.:...|:  :..|.|..|  ||.|||......|::.|
Mouse    59 GTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKV--IEINPYLLGTMAGGAADCSFWERLLARQ 121

  Fly   102 LELHRLQTDREVRVVAANTMLKQMLFRYQG-HISAALVLGGVDKTGPHIYSIHPHGSSDKLPYAT 165
            ..::.|:....:.|.||:.:|..|:::|:| .:|...::.|.||.||.:|.:...|:.......:
Mouse   122 CRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFS 186

  Fly   166 MGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASGVFNDLGSGSNIDLCVIRK 219
            :||||:.|..|.:..:..||..||...|.|.||....:.|..||..::|..:|:
Mouse   187 VGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVRE 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 PRE1 42..232 CDD:223711 55/181 (30%)
proteasome_beta_type_7 42..228 CDD:239732 55/181 (30%)
Pr_beta_C 232..264 CDD:289249
Psmb5NP_035316.1 proteasome_beta_type_5 60..247 CDD:239730 57/183 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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