DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2 and pbs-2

DIOPT Version :9

Sequence 1:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_493271.1 Gene:pbs-2 / 173168 WormBaseID:WBGene00003948 Length:277 Species:Caenorhabditis elegans


Alignment Length:259 Identity:109/259 - (42%)
Similarity:160/259 - (61%) Gaps:16/259 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DLPRAG-FNFDNCKRNATLLNRGFKPPTTTKTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCA 71
            |:.|.| |:|.||.||..:...|.|.|..|.||||||.:.:|.|:::|||:|||.|.|::||:|.
 Worm    14 DMDRGGAFDFSNCIRNQAMCKMGGKAPKLTSTGTTIVAVAFKGGLVMGADSRATAGNIIADKHCE 78

  Fly    72 KIHYLAKNIYCCGAGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQMLFRYQGHISAA 136
            |:|.|.::||.||||||||.:..|.::|..|.|..|.|.|:.||:.|....||.||.|||:|.|.
 Worm    79 KVHKLTESIYACGAGTAADLDQVTKMLSGNLRLLELNTGRKARVITALRQAKQHLFNYQGYIGAY 143

  Fly   137 LVLGGVDKTGPHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASG 201
            |::||||.||||:|....:|::...|:...||||.||:|:.|..:|.|::::|.:|||:.|:.:|
 Worm   144 LLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTKDEAEKLVQRALEAG 208

  Fly   202 VFNDLGSGSNIDLCVIR------KGSV--EYLRNYELANKKGKRQLDYRFKTGTSTVL-HTNIK 256
            :..|..||::::|.:|.      ||.:  |:.:..|      ...|.|:|:.|.:.|| |...|
 Worm   209 MHGDNASGNSLNLVIIEPSETVFKGPIVPEFCKRPE------PNDLVYKFQAGATKVLKHKTYK 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2NP_524076.2 PRE1 42..232 CDD:223711 84/197 (43%)
proteasome_beta_type_7 42..228 CDD:239732 83/193 (43%)
Pr_beta_C 232..264 CDD:289249 8/26 (31%)
pbs-2NP_493271.1 PRE1 43..228 CDD:223711 85/184 (46%)
proteasome_beta_type_7 47..235 CDD:239732 84/187 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157341
Domainoid 1 1.000 182 1.000 Domainoid score I2056
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I2377
Isobase 1 0.950 - 0 Normalized mean entropy S457
OMA 1 1.010 - - QHG53608
OrthoDB 1 1.010 - - D415498at33208
OrthoFinder 1 1.000 - - FOG0001188
OrthoInspector 1 1.000 - - otm14620
orthoMCL 1 0.900 - - OOG6_101382
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1015
SonicParanoid 1 1.000 - - X1020
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.750

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