DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL39 and AT5G26830

DIOPT Version :10

Sequence 1:NP_524075.2 Gene:mRpL39 / 39627 FlyBaseID:FBgn0036462 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_198035.2 Gene:AT5G26830 / 832741 AraportID:AT5G26830 Length:709 Species:Arabidopsis thaliana


Alignment Length:328 Identity:87/328 - (26%)
Similarity:150/328 - (45%) Gaps:48/328 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAATKLHKTSWCALRQLQQYRTKANFSGSSASLAKRNDLFNQEQRRQRDAVGRIDKIEVRYLGLP 66
            |:...|..:|:|.:..:.....| :.:..||.:.||..||.|.|..|      ::.::    .||
plant    18 SSLPLLSSSSFCTVPTMAANHPK-DEAYLSAVIPKRIKLFEQIQANQ------LENLK----SLP 71

  Fly    67 ED---VTLVMNGNI-------STPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCTLQLL 121
            .|   ||| .:||:       :||.:.|..:|:|....:.::.:| .|.|||:|||:..|.|:|.
plant    72 HDPIKVTL-PDGNVKEGKKWETTPMDIAAQISKGLANSALISAVD-DVLWDMNRPLEGDCKLELF 134

  Fly   122 NFHVSEPHVVNKAFWRTCSFMLGAALNRAFKPEANLQLHSFP----GPNIKSGSFVHDIVLQTQN 182
            .|...:.   ....|.:.:.:||.||.:    |...||...|    |.......|..::.|...:
plant   135 KFDSDKG---RDTLWHSSAHILGQALEQ----EYGCQLCIGPCTTRGEGFYYDGFYGELGLSDNH 192

  Fly   183 WEPGKEEMRALSAEMVKLAAQDLRIERLDVQQDLAQEMFKDSKYKSEQLPSISQQTNGRVTLYRL 247
            :.       ::.|...|.|.:....||::|.:|.|.|||.::.:|.|.:..:.....  :|:||.
plant   193 FP-------SIEAGAAKAAKEAQPFERIEVTKDQALEMFSENNFKVELINGLPADMT--ITVYRC 248

  Fly   248 GDHIDISRGPMVASTSFLG--KCVISAAHKVAEEGPSGAFYRIQGVALPSGFQL-NHVAFGVLEE 309
            |..:|:.|||.:.:|||:.  ||:.:::.....:....:..|:.|::.|...|| .::.|  |||
plant   249 GPLVDLCRGPHIPNTSFVKAFKCLRASSAYWKGDKDRESLQRVYGISYPDQKQLKKYLQF--LEE 311

  Fly   310 RSK 312
            ..|
plant   312 AKK 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL39NP_524075.2 PLN02908 31..>265 CDD:178496 69/247 (28%)
AT5G26830NP_198035.2 PLN02908 28..708 CDD:178496 84/318 (26%)

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