DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL39 and Tars2

DIOPT Version :10

Sequence 1:NP_524075.2 Gene:mRpL39 / 39627 FlyBaseID:FBgn0036462 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_082207.2 Gene:Tars2 / 71807 MGIID:1919057 Length:723 Species:Mus musculus


Alignment Length:680 Identity:120/680 - (17%)
Similarity:210/680 - (30%) Gaps:254/680 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 FRPNFVKMNEIMVEKGYDKVVGFVPTGWTYEVKRNKFAVRFKDSME-----------IHLVPYSE 354
            :|| .:..||:.:...:::....        ::|.:|..|.::|..           :.|:|.:.
Mouse   330 YRP-LISTNEVTLSPRHEQAKRL--------LERARFKARSQNSKSESPTCLGQREGLELLPIAV 385

  Fly   355 HSN---------YDELREFIKFLKPKRVIPTVGVDIEKFDCKEVNKMQKHFSGLVDEMANKKDFL 410
            .|.         .|||..           |....||         :.:.|..|:......:....
Mouse   386 SSTLHSAVLVTAQDELAS-----------PLQSPDI---------RGRNHERGMRSRRYGQSPTR 430

  Fly   411 LGFYRQSYQKNEKSDVDVV----------SHSA-EVYEEEEKNACEDG----------------- 447
            :.|..:|.::.|:..::.|          |||| ::..|.|.|..|:|                 
Mouse   431 VRFEDESEKEAERRYLERVRERGPVVVEKSHSAQQLKAESEYNISEEGRGAAINWVNIGIPVAIL 495

  Fly   448 -------GENVPSSR--------GPIL-------------HDTTPSSDSRLLIKLRDSLPAWVTE 484
                   ...||...        |.||             |..|.|.:.        ::|.|||.
Mouse   496 TKEGDCLAAMVPKDEMLRTCEACGSILAAAQTKDCLSKSTHGITDSQEK--------AVPRWVTP 552

  Fly   485 EQ---------------------MLDLI-KKHAGNPVDIVSNF--------------------YE 507
            .|                     :.|.: :...|...:.:|.|                    |.
Mouse   553 NQTCRRTMHPTFLERLTLTGSVSLTDNVGRGGVGGAGESMSAFGKLRRRSRKGESRAETANGPYA 617

  Fly   508 YEAELYKQ-------ASLPTPSLNNQAV-LFDDDVTDLQPNPVKGICPDVQAIQKGFDLPRKMNL 564
            ...:|:.|       :||..|:.:::.: :..:..|:...:     ..|.:...|..|.|..:  
Mouse   618 RSQDLWAQRRNSKTRSSLEDPTTHSKLLKMQSEGATETSSD-----AEDKELANKVSDSPPHL-- 675

  Fly   565 TKGTISPGKRGKSSGSKSNKKAKKDPKSKPVGPGQPTLFK-------FFNKVLDGGSNSVSVGSE 622
                  |.|....|||          ||:|.|....||..       ..:..:||||:..::  .
Mouse   676 ------PIKSALKSGS----------KSRPSGQRVVTLMPSVQYRLIHLDHTMDGGSHHENI--P 722

  Fly   623 TEE---------------------CN-------------TDKKMVHIDASEAYKEVTDQFIDIVN 653
            |||                     ||             ||.:.:.|..|.: ..|||..:    
Mouse   723 TEEHLSVTLSASPQVHSATSGLTLCNRPSSLRYSSSMLTTDLQALAIWDSGS-DPVTDSHL---- 782

  Fly   654 GSESLRDYAASIIDEAKGDISRALNIYYSKPREIPGD-------HAGER-GLSSKTIQYPKCSEA 710
               :||....|..::.:.::.||.:    :..||..|       .|||| |....:::....:..
Mouse   783 ---ALRTMGMSRTEDLRAELLRAEH----RKAEIHWDDSLAMSRRAGEREGRPKLSLRRFFSAMG 840

  Fly   711 CSSQEDKKASENSGHAVNICVQTSAEESVDKNYVSLPPEKYQPKEHACWREGQPAPYIHLVRTFA 775
            .:|.........|....::|..|:......:..|||   |..|...:...| .|...:....:..
Mouse   841 LNSMGKLVKGNRSNSMEHLCSPTARSSPTHRGLVSL---KRTPSLQSLHTE-SPLAQLRKASSVQ 901

  Fly   776 SVESEKGKIKAMSMLCNMFRSLFALSPEDV 805
            |::|.|.|.:..::|..:...| :|:|.|:
Mouse   902 SLQSPKRKFERSTILGELSLPL-SLAPRDL 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL39NP_524075.2 PLN02908 31..>265 CDD:178496
Tars2NP_082207.2 PLN02908 27..715 CDD:178496 72/444 (16%)
Blue background indicates that the domain is not in the aligned region.

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