DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL39 and ThrRS

DIOPT Version :10

Sequence 1:NP_524075.2 Gene:mRpL39 / 39627 FlyBaseID:FBgn0036462 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_723725.1 Gene:ThrRS / 45784 FlyBaseID:FBgn0027081 Length:747 Species:Drosophila melanogaster


Alignment Length:326 Identity:83/326 - (25%)
Similarity:151/326 - (46%) Gaps:30/326 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 HKTSWCALRQLQQYRTKANFSGSSAS--------LAKRNDLFNQEQRRQRDAVGRIDKIEVRYLG 64
            |..:..|.:..::.:.|.:..|.:..        :.:|| :|.::.:.:.:|.....|.|...:.
  Fly    49 HSYATLAAKMKKEKKEKPSGGGDTRKELSPLPKYIEERN-VFWEKCKAEYEAELAAKKREPIKVT 112

  Fly    65 LPEDVTLVMNGNISTPFNCAQHLSEGHCKRSALALIDGSVPWDMHRPLQESCTLQLLNFHVSEPH 129
            ||:...:......:||:..|:.:|:|....:.::.::|.| ||:.|.|:.:||||||.|...|..
  Fly   113 LPDGKQVDATSWETTPYEVARGISQGLADNTVISKVNGEV-WDLDRVLEGNCTLQLLKFDDPEAQ 176

  Fly   130 VVNKAFWRTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIVLQTQNWEPGK-EEMRAL 193
            .|   ||.:.:.::|.|:.|.:..      |...||.|::| |.:|:.|:.:...... ..|..|
  Fly   177 AV---FWHSSAHIMGEAMERIYGG------HLCYGPPIENG-FYYDMHLEGEGISTNDYGAMEGL 231

  Fly   194 SAEMVKLAAQDLRIERLDVQQDLAQEMFKDSKYKSEQLPSISQQTNGRVTLYRLGDHIDISRGPM 258
            ..::||   :....|||::::....||||.:::|...|.  .:.|..|.|:|:.|..||:.|||.
  Fly   232 VKQIVK---EKQNFERLEMKKSDLLEMFKYNEFKVRILN--EKVTTDRTTVYKCGSLIDLCRGPH 291

  Fly   259 VASTSFLGKCVISAAHKVAEEGPSGA--FYRIQGVALPSGFQLNHVAFGVLEERSKKPSPARLPN 321
            |..|..:....|:.......||.:.|  ..|:.|::.|...||..  :..|:|.:.|....::..
  Fly   292 VRHTGKVKALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKE--WEKLQEEAAKRDHRKIGR 354

  Fly   322 E 322
            |
  Fly   355 E 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL39NP_524075.2 PLN02908 31..>265 CDD:178496 66/242 (27%)
ThrRSNP_723725.1 PLN02908 79..740 CDD:178496 79/296 (27%)

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