DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zip71B and Slc39a12

DIOPT Version :9

Sequence 1:NP_001097608.1 Gene:Zip71B / 39626 FlyBaseID:FBgn0036461 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_038951487.1 Gene:Slc39a12 / 291328 RGDID:1309305 Length:706 Species:Rattus norvegicus


Alignment Length:562 Identity:149/562 - (26%)
Similarity:236/562 - (41%) Gaps:171/562 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLVLNL--FCLGSLFFKTVPASTEYNKYVAQIFQKYGNGGTINFEGLEHLMFSLNLGQIQFDPSH 68
            ::.|:|  .|||.   |..|:..::.:|   ||........::...||.|:..|:..: .....:
  Rat   211 IIALSLQGVCLGR---KDSPSPDDFTEY---IFSFLNRTNALHLSELEELLNMLSTRR-ACTKIN 268

  Fly    69 TIDQHRPQGYSNEMPHATNVTYYFEPTRVNATDEEALELQISPRGNHSNSQSEAEVPEFLEIHDP 133
            |:.:|  |...|...|...     :|....|.|:.:        |:||.|..:            
  Rat   269 TLHEH--QRKQNTAVHGLR-----DPKSAAAMDKVS--------GDHSVSWDQ------------ 306

  Fly   134 KHRHPRESSEPVAACLSPKSLLSLIV-NHNDLHKNIAYRKLLIKNDVSSTDGVHNSEEEYNEFIN 197
                         ||.|.:.|:.:.: ||:.|             .:|..|              
  Rat   307 -------------ACFSAQQLVEIFLQNHSSL-------------SISKED-------------- 331

  Fly   198 SVRITPRAFMKLCPALLAQIDNGVCKQPAVRSVNLNDKNQKI--------WYAWIYASITMLILS 254
                    |.:|.|.::.|:.:..|:.|         ::||.        .|.:...::|:|.|.
  Rat   332 --------FKQLSPGIIQQLLSCSCQVP---------RDQKAKPPPTTLEKYGYSTVAVTLLTLG 379

  Fly   255 ACGLLGILLVPLMKSAA--YQEILKFLVSIAVGTLAGDALMHLLPHALFKEEKHEEEVTGINPLE 317
            :  :||..|| |..|..  |..||:..|.:|||||:||||:||:|..|   ..|::|.      |
  Rat   380 S--MLGTALV-LFHSCEENYSLILQLFVGLAVGTLSGDALLHLIPQVL---GLHKQEA------E 432

  Fly   318 SDHKHSNEAAL---------LCGCTFLAALFMYMLENLIPLLKGGKPGHGHSHGHGHSHGRSHGH 373
            ..|.|.:::.:         :.|...:...|:.::.   |..||....:||: ||.|..|.|   
  Rat   433 LGHFHESQSPIWKLLGLLGGIHGFFLIEKCFILLVS---PNTKGLPLVNGHA-GHTHHLGLS--- 490

  Fly   374 MEKPAAKD---------AIDLPPPRELNVMLQEAKLDEKTPDRP-------------LTPVAFMV 416
               |...|         .|.|..|.           |.:|.:.|             ::.:|.||
  Rat   491 ---PELNDQSGGGKSISTIQLKGPE-----------DSQTAELPKGNVPASNRNRKTISLLAVMV 541

  Fly   417 IIGDGLHNLTDGLAIGAAFASDPVTGFATAFAVLCHELPHELGDFALLLQTGVSMRRAVYMNIVS 481
            ::||||||..|||.||.||:|...:|..|..|:||||:|||:||||:||.:|:|:|.|:.||.:|
  Rat   542 LVGDGLHNFADGLVIGTAFSSSLESGVTTTIAILCHEIPHEMGDFAVLLSSGLSIRTAILMNFLS 606

  Fly   482 SVLSFVGMSVGLFIAGIGDGMTQ-WIYAATAGSFLYIAFADL 522
            ::.:|:|:.:||.::  .|...| ||...|||.|||::...:
  Rat   607 ALTAFIGLYIGLSVS--ADPRVQDWILTVTAGMFLYLSLVGM 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zip71BNP_001097608.1 Zip 242..559 CDD:280666 105/315 (33%)
Slc39a12XP_038951487.1 ZIP4_domain 62..221 CDD:408101 2/9 (22%)
Zip 368..646 CDD:396884 105/312 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0428
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D657777at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12191
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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