DRSC/TRiP Functional Genomics Resources

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Protein Alignment mnd and cadB

DIOPT Version :10

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_418556.1 Gene:cadB / 948654 ECOCYCID:EG10132 Length:444 Species:Escherichia coli


Alignment Length:484 Identity:118/484 - (24%)
Similarity:198/484 - (40%) Gaps:88/484 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KQIGLLDGVAIIVGVIVGSGIFVSPKGVLKFSGSIGQSLIVWVLSGVLSMVGAL----CYAELGT 101
            |:|||.....::.|.::||||.:.|..:....|     :.:|  ..::|::||:    .||.|.|
E. coli     5 KKIGLFACTGVVAGNMMGSGIALLPANLASIGG-----IAIW--GWIISIIGAMSLAYVYARLAT 62

  Fly   102 MIPKSGGDYAYIG---TAFGPLPAFLYL---WVALLILVPTGNAITALTFAIYLLKPFWPSCDAP 160
            ..|:.||..||.|   .|||.....||.   |:        ||....:| |:..|..|:|..:.|
E. coli    63 KNPQQGGPIAYAGEISPAFGFQTGVLYYHANWI--------GNLAIGIT-AVSYLSTFFPVLNDP 118

  Fly   161 IEAVQLLAAAMICVLTLINCYNVKWVTRVTDIFTGTKVVALLVIVGAGV-WWLFDGNT--EHWDN 222
            :.| .:...|::.|.|.:|.....||:|:|.|  |..:|.:.|::.|.| |..||..|  .:|: 
E. coli   119 VPA-GIACIAIVWVFTFVNMLGGTWVSRLTTI--GLVLVLIPVVMTAIVGWHWFDAATYAANWN- 179

  Fly   223 PFSGGLQDPGYIALAFYSGLFSYSGWNYLNFVTEELKDPYRNLPKAICISMPVVTVIYMITNIAY 287
              :....|...|..:....|:::.|.......|..:|:|.|.:|.|..:...:..::|    ||.
E. coli   180 --TADTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIVY----IAA 238

  Fly   288 FSVLS---PDEIL-SSDAVAVTFGDKMLGYMSWIMPFAVACSTFGSLNGAIFASSRLFFVG---- 344
            ..|||   |..:: :|.|........:||  :|..|...|.:.|..|..   ..|.:..||    
E. coli   239 TQVLSGMYPSSVMAASGAPFAISASTILG--NWAAPLVSAFTAFACLTS---LGSWMMLVGQAGV 298

  Fly   345 --ARNGHLPAAISLINVNCLTPVPSLIFLGV-LTLLLLFI----------EDVY-------VLIN 389
              |.:|:.|.....::.|.: |...|:...| :|.|::.|          .|::       ||:.
E. coli   299 RAANDGNFPKVYGEVDSNGI-PKKGLLLAAVKMTALMILITLMNSAGGKASDLFGELTGIAVLLT 362

  Fly   390 YVSYVEALFTLISVSGLLWMRYKQPKTERPIKVNLALPIIYLIVCLFLVIFSCTQTPYVVGIGTI 454
            .:.|..:...||...|:....:          |:|...::..:.| |:.:...:.....   ||.
E. coli   363 MLPYFYSCVDLIRFEGVNIRNF----------VSLICSVLGCVFC-FIALMGASSFELA---GTF 413

  Fly   455 IILSGIPVYYL-TIHKPVKWLADTSQAIN 482
            |:...|.::|. .:|:......|...|.|
E. coli   414 IVSLIILMFYARKMHERQSHSMDNHTASN 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 118/484 (24%)
cadBNP_418556.1 cadB 1..435 CDD:182458 115/475 (24%)

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