DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and CAN1

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_010851.1 Gene:CAN1 / 856646 SGDID:S000000789 Length:590 Species:Saccharomyces cerevisiae


Alignment Length:560 Identity:116/560 - (20%)
Similarity:202/560 - (36%) Gaps:186/560 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QASDSLIPRQVFEVPPAEPNNSTADSGSQGSG---------VKLKKQ-----IGLLDGVAIIVGV 55
            :.|..|.|.:.|   |...|.....|...|.|         .::|::     ||:     |.:|.
Yeast    44 EKSKELYPLRSF---PTRVNGEDTFSMEDGIGDEDEGEVQNAEVKRELKQRHIGM-----IALGG 100

  Fly    56 IVGSGIFVSPKGVLKFSGSIGQSLIVWVLSGVLSMVGALCYAELGTMIPKSGG----DYAYIGTA 116
            .:|:|:|:.....|..:|.:| :||.::..|.|:........|:.|.||.:..    ...::..|
Yeast   101 TIGTGLFIGLSTPLTNAGPVG-ALISYLFMGSLAYSVTQSLGEMATFIPVTSSFTVFSQRFLSPA 164

  Fly   117 FGPLPAFLYLWVALLILVPTGNAITALTFAIYL-----LKPFWPSCDAPIEAVQLLAAAMI---- 172
            ||....::| |.:           .|:|||:.|     :..|| :...|:       ||.|    
Yeast   165 FGAANGYMY-WFS-----------WAITFALELSVVGQVIQFW-TYKVPL-------AAWISIFW 209

  Fly   173 CVLTLINCYNVK-------WVTRVTDIFTGTKVVALL--------VIVGAGVWWLFDG--NTEHW 220
            .::|::|.:.||       ||..:       ||:|::        ::.||||    .|  ...:|
Yeast   210 VIITIMNLFPVKYYGEFEFWVASI-------KVLAIIGFLIYCFCMVCGAGV----TGPVGFRYW 263

  Fly   221 DNPFSGGLQDPGYIA--------LAFYSGL----FSYSGWNYLNFVTEELKDPYRNLPKAI-CIS 272
            .||   |...||.|:        |.:.|.|    |::.|...:.....|..:|.:::|:|| .:.
Yeast   264 RNP---GAWGPGIISKDKNEGRFLGWVSSLINAAFTFQGTELVGITAGEAANPRKSVPRAIKKVV 325

  Fly   273 MPVVTVIYMITNIAYFSVLSPDEILSSDAVAVTFGDKML----GYMSWIMPFAVACSTFG----- 328
            ..::|  :.|.::.:..:|.|            :.|..|    .|:| ..||.:|....|     
Yeast   326 FRILT--FYIGSLLFIGLLVP------------YNDPKLTQSTSYVS-TSPFIIAIENSGTKVLP 375

  Fly   329 -------------SLNGAIFASSRLFFVGARNGHLPAAISLINVNCLTPVPSLIFLGVLTLLLLF 380
                         :.|..|:..||:.|..::|...|..:|...            .|.:..:.:|
Yeast   376 HIFNAVILTTIISAANSNIYVGSRILFGLSKNKLAPKFLSRTT------------KGGVPYIAVF 428

  Fly   381 IEDVYVLINYV-------SYVEALFTLISVSGLL-WM-------RYKQ-------PKTERPIKVN 423
            :...:..:.|:       ...|.|..:..|:|.. |:       |:.|       .:.|.|.|..
Yeast   429 VTAAFGALAYMETSTGGDKVFEWLLNITGVAGFFAWLFISISHIRFMQALKYRGISRDELPFKAK 493

  Fly   424 LALPIIYLIVCLFLVIFSCTQTPYVVGIGTIIILSGIPVY 463
            | :|.:......|:.|              |||:.|...:
Yeast   494 L-MPGLAYYAATFMTI--------------IIIIQGFTAF 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 111/543 (20%)
CAN1NP_010851.1 2A0310 85..562 CDD:273334 107/516 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345704
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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