DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and SAM3

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_015049.1 Gene:SAM3 / 855854 SGDID:S000006195 Length:587 Species:Saccharomyces cerevisiae


Alignment Length:407 Identity:89/407 - (21%)
Similarity:152/407 - (37%) Gaps:92/407 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 IIVGVIVGSGIFVSPKGVLKFSGSIGQS--LIVWVLSGVLSMVGALCYAELGTMIPKSGGDYA-- 111
            |.:|..:|:|:|:.    |.:|.:.|.:  ||.::|.|..........|||....|.| |.||  
Yeast    85 IAIGGTLGTGLFIG----LGYSLASGPAALLIGFLLVGTSMFCVVQSAAELSCQFPVS-GSYATH 144

  Fly   112 ---YIGTAFGPLPAFLYLWVALLILVPTGNAITALTFAIYLLKPFWPSCDAPIEAVQLLAAAMIC 173
               :|..:.|...|..|. :|.||..|:.....|||.:      :|.....|    .:..|....
Yeast   145 VSRFIDESVGFTVATNYA-LAWLISFPSELIGCALTIS------YWNQTVNP----AVWVAIFYV 198

  Fly   174 VLTLINCYNVKWVTRVTDIFTGTKVVALLVIVGAGVWWLFDG--------NTEHWDNPFSGGLQD 230
            .:.::|.:.|:.........:..||:|:.:.:..|:..:..|        ..::|.:|  |....
Yeast   199 FIMVLNLFGVRGFAETEFALSIIKVIAIFIFIIIGIVLIAGGGPNSTGYIGAKYWHDP--GAFAK 261

  Fly   231 PGY--IALAFYSGLFSYSGWNYLNFVTEELKDPYRNLPKAICISMPVVTVIYMITNIAYFSVLSP 293
            |.:  :...|.|..||:.|...:...:.|.|: ...:.:|...:...:.:.| ||.:.....|.|
Yeast   262 PVFKNLCNTFVSAAFSFGGSELVLLTSTESKN-ISAISRAAKGTFWRIAIFY-ITTVVIIGCLVP 324

  Fly   294 ---DEILS---SDAVAVTFGDKMLGYMSWIMPFAVACSTFGSL--------------------NG 332
               ..:||   |:.|:.:             ||.:|.|..||:                    |.
Yeast   325 YNDPRLLSGSNSEDVSAS-------------PFVIALSNTGSMGAKVSNFMNVVILVAVVSVCNS 376

  Fly   333 AIFASSRLFFVGARNGHLPAAISLINVNCLTPVPSLIFLGVLTLLLLFI-----EDVYVLINYVS 392
            .::|||||......:|.||:..|.::... .|:..:...|...||...:     ::|:..     
Yeast   377 CVYASSRLIQALGASGQLPSVCSYMDRKG-RPLVGIGISGAFGLLGFLVASKKEDEVFTW----- 435

  Fly   393 YVEALFTLISVSGLL-W 408
                ||.|.|:|... |
Yeast   436 ----LFALCSISSFFTW 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 89/407 (22%)
SAM3NP_015049.1 2A0310 74..551 CDD:273334 89/407 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345687
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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