DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and LYP1

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_014131.1 Gene:LYP1 / 855453 SGDID:S000005212 Length:611 Species:Saccharomyces cerevisiae


Alignment Length:615 Identity:129/615 - (20%)
Similarity:219/615 - (35%) Gaps:185/615 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EVPPAEPNNSTADSGSQGSGVKLKKQIGLLDGVAII----------------------------- 52
            |:...:|:|.|............||:.|.|.|.||.                             
Yeast    36 EMEAIDPSNKTTPYSIDEKQYNTKKKHGSLQGGAIADVNSITNSLTRLQVVSHETDINEDEEEAH 100

  Fly    53 --------------VGVI-----VGSGIFVSPKGVLKFSGSIGQSLIVWVLSGVLSMVGALCYAE 98
                          :|:|     :|:|:||.....|..:|.:| |||.::..|.:.........|
Yeast   101 YEDKHVKRALKQRHIGMIALGGTIGTGLFVGISTPLSNAGPVG-SLIAYIFMGTIVYFVTQSLGE 164

  Fly    99 LGTMIPKSGG----DYAYIGTAFGPLPAFLYL--WVALLILVPTGNAITALTFAIYL-----LKP 152
            :.|.||.:..    ...::..|||....::|.  |              |:|:|:.:     :..
Yeast   165 MATFIPVTSSITVFSKRFLSPAFGVSNGYMYWFNW--------------AITYAVEVSVIGQVIE 215

  Fly   153 FWPSCDAPIEAVQLLA--AAMICVLTLINCYNVK-------WVTRVTDI-FTGTKVVALLVIVGA 207
            :|      .:.|.|.|  |....::||:|.:.||       ||..|..: ..|..:.||:::.|.
Yeast   216 YW------TDKVPLAAWIAIFWVIITLMNFFPVKVYGEFEFWVASVKVLAIMGYLIYALIIVCGG 274

  Fly   208 GVWWLFDG--NTEHWDNPFSGGLQDPGYIA--------LAFYSGL----FSYSGWNYLNFVTEEL 258
            .    ..|  ...:|.||   |...||.|:        |.:.|.|    |:|.|...:.....|.
Yeast   275 S----HQGPIGFRYWRNP---GAWGPGIISSDKSEGRFLGWVSSLINAAFTYQGTELVGITAGEA 332

  Fly   259 KDPYRNLPKAICISMPVV--TVIYMITNIAYFSVLSP--DEILSSDAVAVTFGDKMLGYM---SW 316
            .:|.:.:|:||   ..||  .|::.|.::.:..:|.|  |..||:.:..:.....::...   ::
Yeast   333 ANPRKTVPRAI---NKVVFRIVLFYIMSLFFIGLLVPYNDSRLSASSAVIASSPFVISIQNAGTY 394

  Fly   317 IMP----FAVACSTFGSLNGAIFASSRLFFVGARNGHLPAAISLINVNCLTPVPSLIFLGVLTLL 377
            .:|    ..|..:...:.|..::..||:.:..||.|:.|.....:.   ...||   :|||:...
Yeast   395 ALPDIFNAVVLITVVSAANSNVYVGSRVLYSLARTGNAPKQFGYVT---RQGVP---YLGVVCTA 453

  Fly   378 LLFIEDVYVLINYVSYVEALFTLISVSGL----LWM-------RYKQPKTER-------PIKVNL 424
            .|.:....|:.|..:  .|...||::|.|    .|:       |:.|....|       |.|..|
Yeast   454 ALGLLAFLVVNNNAN--TAFNWLINISTLAGLCAWLFISLAHIRFMQALKHRGISRDDLPFKAKL 516

  Fly   425 ALP------IIYLIVCLFLVIFS--CT------QTPYVVGIGTIIILSGIPVYY----------L 465
             :|      ..::.|.:|:..|.  |.      .|.|:..|...::..|..:||          :
Yeast   517 -MPYGAYYAAFFVTVIIFIQGFQAFCPFKVSEFFTSYISLILLAVVFIGCQIYYKCRFIWKLEDI 580

  Fly   466 TIH------KPVKWLADTSQAINLWCSKFF 489
            .|.      :.:.|..|..:  ||| .||:
Yeast   581 DIDSDRREIEAIIWEDDEPK--NLW-EKFW 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 128/610 (21%)
LYP1NP_014131.1 2A0310 107..583 CDD:273334 110/515 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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