DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and ALP1

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_014129.1 Gene:ALP1 / 855451 SGDID:S000005214 Length:573 Species:Saccharomyces cerevisiae


Alignment Length:506 Identity:111/506 - (21%)
Similarity:201/506 - (39%) Gaps:130/506 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KLK-KQIGLLDGVAIIVGVIVGSGIFVSPKGVLKFSGSIGQSLIVWVLSGVLSMVGALCYAELGT 101
            ||| :.||:     |.:|..:|:|:.:.....|..:|.:| :||.::..|.:.........|:.|
Yeast    69 KLKQRHIGM-----IALGGTIGTGLIIGIGPPLAHAGPVG-ALISYLFMGTVIYSVTQSLGEMVT 127

  Fly   102 MIP--KSGGDYA--YIGTAFGPLPAFLYLWVALLILVPTGNAITALTFAIYL-----LKPFWPSC 157
            .||  .|...:|  ::..|.|....::| |::           ...|||:.|     :..:|   
Yeast   128 FIPVTSSFSVFAQRFLSPALGATNGYMY-WLS-----------WCFTFALELSVLGKVIQYW--- 177

  Fly   158 DAPIEAVQLLAAAMI--CVLTLINCYNVKWVTRVTDIFTGTKVVALL--------VIVGAGVWWL 212
               .|||.|.|..:|  |:||.:|.:.||:...........||:|||        |:.|||   .
Yeast   178 ---TEAVPLAAWIVIFWCLLTSMNMFPVKYYGEFEFCIASIKVIALLGFIIFSFCVVCGAG---Q 236

  Fly   213 FDG--NTEHWDNPFSGGLQDPGYIA--------LAFYSGL----FSYSGWNYLNFVTEELKDPYR 263
            .||  ...:|.||   |...||.|:        |.:.|.|    |:|.|...:.....|..:|.:
Yeast   237 SDGPIGFRYWRNP---GAWGPGIISSDKNEGRFLGWVSSLINAAFTYQGTELVGITAGEAANPRK 298

  Fly   264 NLPKAICISMPVVTVIYMITNIAYFSVLSP--DEILSSDAVAVTFGDKMLG-------YMSWIMP 319
            .||:|| ..:.|..:::.|.::.:..:|.|  |..|.||.:.|:....|:.       .:..|..
Yeast   299 ALPRAI-KKVVVRILVFYILSLFFIGLLVPYNDPKLDSDGIFVSSSPFMISIENSGTKVLPDIFN 362

  Fly   320 FAVACSTFGSLNGAIFASSRLFFVGARNGHLPAAISLINVNCLTPVPSLIFLGVLTLLLLFIEDV 384
            ..|..:...:.|..::..||:.:..::|...|..:|.:...   .||   :..||:.        
Yeast   363 AVVLITILSAGNSNVYIGSRVLYSLSKNSLAPRFLSNVTRG---GVP---YFSVLST-------- 413

  Fly   385 YVLINYVSYVE-------ALFTLISVSGL----LWM-------RYKQPKTER-------PIKVNL 424
             .:..:::::|       |...|::::|:    .|:       |:.|...:|       |.|..:
Yeast   414 -SVFGFLAFLEVSAGSGKAFNWLLNITGVAGFFAWLLISFSHIRFMQAIRKRGISRDDLPYKAQM 477

  Fly   425 ALPIIYLIVCLFLVIFSCTQTPYVVGIGTIIILSGIPVYYLTIHKPVKWLA 475
             :|.:......|:.:              |:::.|...:..|. :|:.::|
Yeast   478 -MPFLAYYASFFIAL--------------IVLIQGFTAFAPTF-QPIDFVA 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 111/506 (22%)
ALP1NP_014129.1 2A0310 67..545 CDD:273334 111/506 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345705
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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