DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and SSY1

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_010444.1 Gene:SSY1 / 851738 SGDID:S000002567 Length:852 Species:Saccharomyces cerevisiae


Alignment Length:566 Identity:102/566 - (18%)
Similarity:193/566 - (34%) Gaps:174/566 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KLK-KQIGLLDGVAIIVGVIVGSGIFVSPKGVLKFSGSIGQSLIVWVLSGVLSMVGALCYAELGT 101
            ||| :.|.:|.     :|.....|:|::.......:|..| :|:.:.|:|.:.:...|.:.||.|
Yeast   280 KLKVRHIQMLS-----IGACFSVGLFLTSGKAFSIAGPFG-TLLGFGLTGSIILATMLSFTELST 338

  Fly   102 MIPKSGG----DYAYIGTAFGPLPAFLYLWVALLILVPTGNAITALTFAIYLLKPFWPSCDAPIE 162
            :||.|.|    ...::..|||....:.| |::.::.:|.  .:::.||.:........|......
Yeast   339 LIPVSSGFSGLASRFVEDAFGFALGWTY-WISCMLALPA--QVSSSTFYLSYYNNVNISKGVTAG 400

  Fly   163 AVQLLAAAMICVLTLINCY---NVKWVTRVTDIFTGTKVVALLVIVGAGVWWLFDGNTEH----- 219
            .:.|.:|..| |:.|::..   .:.:|..::.:.....:|..::|:.||     .||..|     
Yeast   401 FITLFSAFSI-VVNLLDVSIMGEIVYVAGISKVIIAILMVFTMIILNAG-----HGNDIHEGVGF 459

  Fly   220 --WDNP-----FSGGLQDPGY----------------------IALAFYSGLFSYSGWNYLNFVT 255
              ||:.     .:.||..|.:                      .|.......|::||.......:
Yeast   460 RYWDSSKSVRNLTYGLYRPTFDLADAGEGSKKGISGPKGRFLATASVMLISTFAFSGVEMTFLAS 524

  Fly   256 EELKDPYRNLPKAICISMPVVTVIYMITNIAYFSVLSPDEILSSDAVAVTFGD-KMLGY------ 313
            .|..:|.:.:|.|...:..:|.:.|:.             ::.|..:.:..|| ::|.|      
Yeast   525 GEAINPRKTIPSATKRTFSIVLISYVF-------------LIFSVGINIYSGDPRLLSYFPGISE 576

  Fly   314 -----------MSWIM---------------------PFAVACSTFG------SLN--------- 331
                       |.|.:                     |:.||...||      :.|         
Yeast   577 KRYEAIIKGTGMDWRLRTNCRGGIDYRQISVGTGYSSPWVVALQNFGLCTFASAFNAILIFFTAT 641

  Fly   332 ---GAIFASSRLFFVGARNGHLPAAISLINVNCLTPVPSLIFLGVLTLLLLFIEDVYVLINYVSY 393
               .::|:.||..:..:.....|....:.:...: |..|:||..:.:::.....|...:.|:   
Yeast   642 AGISSLFSCSRTLYAMSVQRKAPPVFEICSKRGV-PYVSVIFSSLFSVIAYIAVDQTAIENF--- 702

  Fly   394 VEALFTLISVS-GLLWMRYKQPKTERPIKVNLALPIIYLIVCLFLVIFSCTQTPY---------- 447
             :.|..:.|.| .::||           .:||:....|..:.....|.|...:.|          
Yeast   703 -DVLANVSSASTSIIWM-----------GLNLSFLRFYYALKQRKDIISRNDSSYPYKSPFQPYL 755

  Fly   448 ----VVGIGTIIILSGIPVYYLTIHKPVKWLADTSQAINLWCSKFF 489
                :||....:|..|.|.:   ||             :.|.:|.|
Yeast   756 AIYGLVGCSLFVIFMGYPNF---IH-------------HFWSTKAF 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 102/566 (18%)
SSY1NP_010444.1 2A0310 278..819 CDD:273334 102/566 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.