DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and UGA4

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_010071.1 Gene:UGA4 / 851317 SGDID:S000002369 Length:571 Species:Saccharomyces cerevisiae


Alignment Length:554 Identity:121/554 - (21%)
Similarity:198/554 - (35%) Gaps:187/554 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KLKKQ-------------IGLLDGVAIIVGVIVGSGIFVSPKGVLKFSGSIGQSLIVW---VLSG 86
            :||:|             :|||..:|.::|..:|.                |.:.:||   |.:.
Yeast    69 ELKRQFSTLQVFGIAFSIMGLLPSIASVMGGGLGG----------------GPATLVWGWFVAAF 117

  Fly    87 VLSMVGALCYAELGTMIPKSGGDYAYIGTAFGPLPAFLYLW------------VALLILVPTGNA 139
            .:.:|| :..||..:.||.:||               ||.|            ::.:|......|
Yeast   118 FILLVG-ITMAEHASSIPTAGG---------------LYYWTYYYAPEGYKEIISFIIGCSNSLA 166

  Fly   140 ITA------------LTFAIYLLKPFWPSCDAPIEAVQ-----LLAAAMICVLTLINCYNVKWVT 187
            :.|            :..|:.|.|      |...|...     :.|.|:: |:.:..|.....:.
Yeast   167 LAAGVCSIDYGLAEEIAAAVTLTK------DGNFEVTSGKLYGIFAGAVV-VMCICTCVASGAIA 224

  Fly   188 RV--TDIFTGTKVVALLVI---VGAGVWWLFDGNTEHWDNPFSGGLQDPGYIALAFYSGLFSY-S 246
            |:  ..||....::.||.|   :|          |:|    ..||..|..:| ...|..|..: :
Yeast   225 RLQTLSIFANLFIIVLLFIALPIG----------TKH----RMGGFNDGDFI-FGKYENLSDWNN 274

  Fly   247 GWNY--LNFV---------------TEELKDPYRNLPKAICISMPVVTVIYMITNIAYFSVLSP- 293
            ||.:  ..|:               :||.||..:::|..|..|:.|..::..:..|...:.::| 
Yeast   275 GWQFCLAGFMPAVWTIGSFDSCVHQSEEAKDAKKSVPIGIISSIAVCWILGWLIIICLMACINPD 339

  Fly   294 -DEILSSD---AVAVTFGDKMLGYMSWIMPFAVACSTFGSLNGAIF--ASSRLFFVGARNGHLPA 352
             |.:|.|.   |:|....|. || ..|.:.|....:....|.||..  |.||..:..:|:..||.
Yeast   340 IDSVLDSKYGFALAQIIYDS-LG-KKWAIAFMSLIAFCQFLMGASITTAVSRQVWAFSRDNGLPL 402

  Fly   353 AISLINVNCLTPVPSLIFL----GVLTL-LLLFIEDVYVLINYVSYVEALFTL-ISVSGLLWMR- 410
            :..:..|:....||....|    |.|.| ||..|:|        :..:|||:| ::.:.|.|.. 
Yeast   403 SKYIKRVDSKYSVPFFAILAACVGSLILGLLCLIDD--------AATDALFSLAVAGNNLAWSTP 459

  Fly   411 ----------------YKQPKTERPIK--VNLALPIIYLIVCLF----------LVIFSCTQTPY 447
                            :...|...||.  ..:|..:..:|:.:|          .:.::|     
Yeast   460 TVFRLTSGRDLFRPGPFYLGKIWSPIVAWTGVAFQLFIIILVMFPSQQHGITKSTMNYAC----- 519

  Fly   448 VVGIGTIIILSGIPVYYLT-----IHKPVKWLAD 476
            |:|.| |.||:||  ||..     .|.|...|:|
Yeast   520 VIGPG-IWILAGI--YYKVYKKKYYHGPATNLSD 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 121/554 (22%)
UGA4NP_010071.1 2A0304 61..529 CDD:273331 112/529 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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