DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and AGP3

DIOPT Version :10

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_116600.1 Gene:AGP3 / 850489 SGDID:S000001839 Length:558 Species:Saccharomyces cerevisiae


Alignment Length:477 Identity:109/477 - (22%)
Similarity:178/477 - (37%) Gaps:124/477 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SGVK--LK-KQIGLLDGVAIIVGVIVGSGIFVSPKGVLKFSGS----IGQSLIVWVLSGVLSMVG 92
            :|||  || :.|.||     .:|.::|.|..|.....|...|.    :|.|:|..:...|:..:|
Yeast    47 TGVKRALKNRHISLL-----ALGGVIGPGCLVGAGNALNKGGPLALLLGFSIIGIIAFSVMESIG 106

  Fly    93 ALCYAELGTMIPKSGGDYAYIGTAF--GPLPA---FLYLWVALLILVPTGNAITALTFAIYLLKP 152
                 |:.|:.| |||.:..:...|  ..|||   :.|:.|...:|....|.::::.       .
Yeast   107 -----EMITLYP-SGGGFTTLARRFHSDALPAVCGYAYVVVFFAVLANEYNTLSSIL-------Q 158

  Fly   153 FWPSCDAPIEAVQLLAAAMICVLTLINCYNVKWVTRVTDIFTGTKV-VALLVIVGAGVWWLF--- 213
            || ....|:....|:......:..|:.          ..:|..|:. :|.|.|||...:::|   
Yeast   159 FW-GPQVPLYGYILIFWFAFEIFQLVG----------VGLFGETEYWLAWLKIVGLVAYYIFSIV 212

  Fly   214 --DGNT--------EHWDNPFSGGLQDPGY--IALAFYSGLFSYSGWNYLNFVTEELKDPYRNLP 266
              .|:.        .:|::|   |....|:  ||:.|......|||...:.....|.|:|.:.:|
Yeast   213 YISGDIRNRPAFGFHYWNSP---GALSHGFKGIAIVFVFCSTFYSGTESVALAATESKNPGKAVP 274

  Fly   267 KAICISMPVVTVIYMITNIAYFSVLSPDEILSSDAVAVTFGDKMLGYMSWIM--PFAVACSTFGS 329
            .|:..::..:.|:|:  .||.|.           ...|.|.|..|...:.::  |.|:|.|..|.
Yeast   275 LAVRQTLWRILVVYI--GIAVFY-----------GATVPFDDPNLSASTKVLKSPIAIAISRAGW 326

  Fly   330 LNGAIFASSRLFFVGARNGHLPAAISLINVNCLTPVPSLIFLGVLTLLLLFIEDVYVLINYVSYV 394
            ..||               ||..|..||  .|::.:...:::|..||..|..|.:...|      
Yeast   327 AGGA---------------HLVNAFILI--TCISAINGSLYIGSRTLTHLAHEGLAPKI------ 368

  Fly   395 EALFTLISVSGLLWMRYKQPKTER---PIKVNLALPIIYLIVCLFLVIFSCTQTPYVV---GIGT 453
                       |.|       |:|   ||........:.||..:.:.:.:.....|:|   |:|.
Yeast   369 -----------LAW-------TDRRGVPIPAITVFNALGLISLMNVSVGAANAYSYIVNLSGVGV 415

  Fly   454 IIILSGIPVYYLTIHKPVKWLA 475
            .|:...|...:|.|.|  .|:|
Yeast   416 FIVWGVISYTHLRIRK--AWVA 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 109/477 (23%)
AGP3NP_116600.1 2A0310 50..517 CDD:273334 107/474 (23%)

Return to query results.
Submit another query.