DRSC/TRiP Functional Genomics Resources

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Protein Alignment mnd and RMV1

DIOPT Version :10

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_196182.1 Gene:RMV1 / 830446 AraportID:AT5G05630 Length:490 Species:Arabidopsis thaliana


Alignment Length:506 Identity:113/506 - (22%)
Similarity:201/506 - (39%) Gaps:106/506 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SDSLIPRQVFEVPPAEPNN-----STAD-SGSQGSGVKLKKQIGLLDGVAIIVGVIVGSGIFVSP 65
            |.|..||...|.||..|.:     :|.| :.|....|...|:|.:|..|.:|...:.|     .|
plant    11 SASQKPRISTENPPPPPPHISIGVTTGDPATSPARTVNQIKKITVLPLVFLIFYEVSG-----GP 70

  Fly    66 KGV---LKFSGSIGQSLIVWVLSGVLSMVGALCYAELGTMIPKSGGDYAYIGTAFGPLPAFLYLW 127
            .|:   :|.:|.:...:...|...:.|:..||..||:|||.|::||...::..|.||...|...|
plant    71 FGIEDSVKAAGPLLAIVGFIVFPFIWSIPEALITAEMGTMFPENGGYVVWVTLAMGPYWGFQQGW 135

  Fly   128 VALLILVPTGNAITALTFAIYLLK--PFWPSCDAPIEAVQLLAAAMICVLTLINCYNVKWVTRVT 190
            |..|..| ..||:..:.|..||..  |...|....:.|:.:|..|    ||.:| |....:..|.
plant   136 VKWLSGV-IDNALYPILFLDYLKSGIPILGSGIPRVAAILVLTVA----LTYLN-YRGLSIVGVA 194

  Fly   191 DIFTGTKVVALLVIVG-------------------AGVWWLFDGNTEHWDNPFSGGLQDPGYIAL 236
            .:..|...:...|::.                   .||.|....||..|:               
plant   195 AVLLGVFSILPFVVMSFMSIPKLKPSRWLVVSKKMKGVNWSLYLNTLFWN--------------- 244

  Fly   237 AFYSGLFSYSGWNYLNFVTEELKDPYRNLPKAICISMPVVTVIYMITNIAYFSVLSPDEILSSDA 301
                  .:|  |:.::.:|.|:::|.:.||:|:..::.:|...|:...:.....::.|:.|.:|.
plant   245 ------LNY--WDSVSTLTGEVENPSKTLPRALFYALLLVVFSYIFPVLTGTGAIALDQKLWTDG 301

  Fly   302 VAVTFGDKMLG--YMSWIMPFAVACSTFGSLNGAIFASSRLFFVGARNGHLPAAISLINVNCLTP 364
            .....| |::|  ::.|.:..|.|.|..|.....:.:.|......|..|.||...:. .....||
plant   302 YFADIG-KVIGGVWLGWWIQAAAATSNMGMFLAEMSSDSFQLLGMAERGMLPEVFAK-RSRYRTP 364

  Fly   365 VPSLIFLGVLTLLLLFIEDVYVLINYVSYVEALFTLISVSGLLW-------------MRYKQPKT 416
                 ::|:     ||.....::::::|:.|    :::...||:             :|.|.|..
plant   365 -----WVGI-----LFSASGVIILSWLSFQE----IVAAENLLYCFGMVLEFITFVRLRMKYPAA 415

  Fly   417 ERPIKVNLALPIIYLIVCLFLVIFSCTQTPYVVGIGTIIILSGIPVYYLTI 467
            .||.|:.:.: :..:::|:          |..|.||.|:..:.:.|..:::
plant   416 SRPFKIPVGV-LGSVLMCI----------PPTVLIGVIMAFTNLKVALVSL 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 106/491 (22%)
RMV1NP_196182.1 PotE 51..464 CDD:440297 101/466 (22%)

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