DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and AAT1

DIOPT Version :10

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_193844.2 Gene:AAT1 / 827860 AraportID:AT4G21120 Length:594 Species:Arabidopsis thaliana


Alignment Length:514 Identity:122/514 - (23%)
Similarity:214/514 - (41%) Gaps:112/514 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SGVKLKKQIGLLDGVAIIVGVIVGSGIFVSPKGVLKFSGSIGQSLIV-WVLSGVLSMVGALCYAE 98
            ||.::||.:...|.:...:|.::||||||...  |:.....|.:::: :|:|||.:|:...||.|
plant    66 SGHEMKKTLTWWDLMWFGIGAVIGSGIFVLTG--LEARNHSGPAVVLSYVVSGVSAMLSVFCYTE 128

  Fly    99 LGTMIPKSGGDYAYIGTAFGPLPAFLYLWVALLILVPTGNAITALTFAIYLL-----KPFWPSCD 158
            ....||.:||.:||:....|...||:.....:|..| .|.|..|.::..|..     ||.    |
plant   129 FAVEIPVAGGSFAYLRVELGDFMAFIAAGNIILEYV-VGGAAVARSWTSYFATLLNHKPE----D 188

  Fly   159 ------------APIEAVQLLAAAMICVLTLINCYNVKWVTRVTDIFTGTKVVALLVIVGAGVWW 211
                        :.::.:.:...|:||||.::   ..|..:|...|.:...:|.:|.::.||   
plant   189 FRIIVHKLGEDYSHLDPIAVGVCAIICVLAVV---GTKGSSRFNYIASIIHMVVILFVIIAG--- 247

  Fly   212 LFDGNTEHWDNPFSGGLQDPGYIALAFYSGLFSYSGWNYLNFVTEELKDPYRNLPKAICISMPVV 276
            ....:.:::.:....|::.....|...:   |:|.|::.::.:.||.|:|.|::|..:..||.|.
plant   248 FTKADVKNYSDFTPYGVRGVFKSAAVLF---FAYIGFDAVSTMAEETKNPGRDIPIGLVGSMVVT 309

  Fly   277 TVIYMITNIAYFSVLSPDEILSSDAVAVTFGDKMLGYMSWIMPFAVACS-----------TFGSL 330
            ||.|.:..:. ..::.|.:.:..||                 ||:||.|           .||:|
plant   310 TVCYCLMAVT-LCLMQPYQQIDPDA-----------------PFSVAFSAVGWDWAKYIVAFGAL 356

  Fly   331 NGAIFASSRLFFVG-----------ARNGHLPAAISLINVNCLTPVPSLIFLGVLTLLLLFIEDV 384
            .|    .:.:..||           ||...:|..::.:|....||:.:.:.:...|.|:.|...:
plant   357 KG----MTTVLLVGAIGQARYMTHIARAHMMPPWLAQVNAKTGTPINATVVMLAATALIAFFTKL 417

  Fly   385 YVLINYVSYVEALFTLISVS-GLLWMRY---KQPKTERPIKVNLALPIIYLIVCLFLVIFSCTQT 445
            .:|.:.:| |..||..:.|: .||..||   .:..|....|         .:|.|.|::.|.|.|
plant   418 KILADLLS-VSTLFIFMFVAVALLVRRYYVTGETSTRDRNK---------FLVFLGLILASSTAT 472

  Fly   446 PYVVGI---GTIIILSGIPVYYLT----------IHKP-------VKWLADTSQAINLW 484
            .....:   |.|.....:|:::|:          ...|       |.||...|.|||::
plant   473 AVYWALEEEGWIGYCITVPIWFLSTVAMKFLVPQARAPKIWGVPLVPWLPSASIAINIF 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 122/514 (24%)
AAT1NP_193844.2 2A0303 58..565 CDD:273330 122/514 (24%)

Return to query results.
Submit another query.