DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and LOC688389

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_001066729.3 Gene:LOC688389 / 688389 RGDID:1589989 Length:469 Species:Rattus norvegicus


Alignment Length:470 Identity:137/470 - (29%)
Similarity:248/470 - (52%) Gaps:17/470 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VKLKKQIGLLDGVAIIVGVIVGSGIFVSPKGVLKFSG-SIGQSLIVWVLSGVLSMVGALCYAELG 100
            ::|.:.:|......:::|.|:|:|||||||||||:|. :|..||.:|...|:|.|:.||...||.
  Rat     1 MRLSRTVGFFHVTMVLLGTIIGTGIFVSPKGVLKYSSLNIPVSLGIWAGCGLLVMLNALSLVELA 65

  Fly   101 TMIPKSGGDYAYIGTAFGPLPAFLYLWVALLILVPTGNAITALTFAIYLLKPFWPSCDAPIEAVQ 165
            |..|.||..|.::..:.|.|.|||.||:.|.... .|.....|..|.||::||:..|.||...::
  Rat    66 TTFPVSGASYYFLKRSLGSLAAFLSLWIQLFSYC-LGLGAHTLLIATYLIQPFYTGCPAPELPIK 129

  Fly   166 LLAAAMICVLTLINCYNVKWVTRVTDIFTGTKVVALLVIVGAGVWWLFDG---NTEHWDNPFSGG 227
            .|:.|::....::|...||.|..:..|.:..|:..|..|...|:..|..|   |...::|.....
  Rat   130 CLSVAILWSFGILNAGGVKTVAWLQTISSMIKMSILCFISLTGLVLLVIGKKENVSKFENALDAE 194

  Fly   228 LQDPGYIALAFYSGLFSYSGWNYLNFVTEELKDPYRNLPKAI--CISMPVVTVIYMITNIAYFSV 290
            |.:......|...|.|:|.|...:..:..|:|:|.:.:|||:  |:|:.:::  |::.|:||.:|
  Rat   195 LPNASQTVEAILQGCFAYRGIFIVINIAGEIKNPSKIIPKAVISCLSITIMS--YLLANVAYLTV 257

  Fly   291 LSPDEILSSDAVAVTFGDKMLGYMSWIMPFAVACSTFGSLNGAIFASSRLFFVGARNGHLPAAIS 355
            |:|.||.:||:|.:|:.::....|.|:|...::.|:..:....|.:::|:.:..:..|.:|...|
  Rat   258 LTPKEITTSDSVVITWVNRAYPSMQWVMSLGISLSSLTTTACGILSAARICYSASLEGQMPFIFS 322

  Fly   356 LINVNCLTPVPSLIFLGVLTLLLLFIEDVYVLINYVSYVEALFTLISVSGLLWMRYKQPKTERPI 420
            ::| |..:||.::..:.:|:.:.:...::..||.|:..:.....::.:..:|.:||::|...||.
  Rat   323 MLN-NHQSPVVAVTQVVILSTVSIICSNLTYLIKYLGIMSIFNDVLYMIAILKLRYQKPALPRPY 386

  Fly   421 KVNLALPIIY--LIVCLFLVIFSCTQTPYVVGI-GTIIILSGIPVYYLTIHKPVKWLADTSQAIN 482
            ||  .||:::  |.:..|.::....|:|.:..| ..:.:|||..||:|.::  :...||..:.|.
  Rat   387 KV--CLPLVFGSLALSSFFILAPIIQSPNIEHIYEGLFLLSGFVVYWLQVY--LYQHADHFKTIT 447

  Fly   483 LWCSKFFICMPNQEK 497
            .:....|..:|:.|:
  Rat   448 CYLQLLFNVLPSDEQ 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 136/467 (29%)
LOC688389XP_001066729.3 PotE 1..437 CDD:223605 131/443 (30%)
SLC5-6-like_sbd 5..>266 CDD:294310 88/263 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351236
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X75
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.