DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and sbm

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster


Alignment Length:453 Identity:194/453 - (42%)
Similarity:298/453 - (65%) Gaps:11/453 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PAEPNNSTADSGSQGSGVKLKKQIGLLDGVAIIVGVIVGSGIFVSPKGVLKFSGSIGQSLIVWVL 84
            |.|.|.||     |...|.|::::||..|||:|||.::||||||||.|:|..:||:|.|.|:|:.
  Fly    66 PLERNGST-----QNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLA 125

  Fly    85 SGVLSMVGALCYAELGTMIPKSGGDYAYIGTAFGPLPAFLYLWVALLILVPTGNAITALTFAIYL 149
            .||||::|||.|||||||...||.::||...|:||.||||:.||:.|:|.|:..||..|:||.|.
  Fly   126 CGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYA 190

  Fly   150 LKPFWPSCDAPIEAVQLLAAAMICVLTLINCYNVKWVTRVTDIFTGTKVVALLVIVGAGVWWLFD 214
            ::.|...||.|...|:::|...|.::..:|||:|.....|.::||..|:||::|::..|.|.|..
  Fly   191 VEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVVVVICGGAWKLMQ 255

  Fly   215 GNTEHWDNPFSGGLQDPGYIALAFYSGLFSYSGWNYLNFVTEELKDPYRNLPKAICISMPVVTVI 279
            |||:|..|.|:|.:.:.|.||.|||:||::|.|||.||:||||:|:|.:|||::|.|.:|:||:.
  Fly   256 GNTQHLSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLC 320

  Fly   280 YMITNIAYFSVLSPDEILSSDAVAVTFGDKMLGYMSWIMPFAVACSTFGSLNGAIFASSRLFFVG 344
            |.:.||:|.:.:||.|::.|:|||||||:::||.::|:||.:|..|||||.||.:||:.||.|..
  Fly   321 YALINISYLAAMSPQEMIESEAVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAA 385

  Fly   345 ARNGHLPAAISLINVNCLTPVPSLIFLGVLTLLLLFIEDVYVLINYVSYVEALFTLISVSGLLWM 409
            :|.|||...:|.::|..|||.|.|||..::...::....:..||::.|:...:|...::..|:.|
  Fly   386 SREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVM 450

  Fly   410 RYKQPKTERPIKVNLALPIIYLIVCLFLV---IFSCTQTPYVVGIGTIIILSGIPVYYLTIHK 469
            ||.:|...||.||.:.:|::.|::.::||   ||...:..|:..:  :.|.:|: ::|:...|
  Fly   451 RYTKPNYPRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYAL--LFIFAGL-IFYVPFVK 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 193/451 (43%)
sbmNP_727785.1 2A0308 53..532 CDD:273332 194/453 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466566
Domainoid 1 1.000 128 1.000 Domainoid score I255
eggNOG 1 0.900 - - E2759_KOG1287
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I235
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 1 1.000 - - mtm9156
orthoMCL 1 0.900 - - OOG6_100314
Panther 1 1.100 - - P PTHR11785
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 1 1.000 - - X75
1211.830

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