DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and Slc7a3

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_058913.1 Gene:Slc7a3 / 29485 RGDID:68342 Length:619 Species:Rattus norvegicus


Alignment Length:604 Identity:132/604 - (21%)
Similarity:230/604 - (38%) Gaps:172/604 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LIPRQVFEVPPAEPNNSTADSGSQGSGVKLKKQIGLLDGVAIIVGVIVGSGIFVSPKGVLKFSGS 74
            |:.|::.|:...|              .:|.:.:..||.||:.||..:|:|::|....|.|  ..
  Rat    13 LVRRRLLELGMGE--------------TRLARCLSTLDLVALGVGSTLGAGVYVLAGEVAK--EK 61

  Fly    75 IGQSLIVWVLSGVLSMV-GALCYAELGTMIPKSGGDYAYIGTAFGPLPAFLYLWVALLILV---- 134
            .|.|:::..|...||.| ..|||||.|..:|.||..|.|.....|.|.||...|..:|..|    
  Rat    62 AGPSIVICFLVAALSSVLAGLCYAEFGARVPGSGSAYLYSYVTVGELWAFTTGWNLILSYVIGTA 126

  Fly   135 ------------PTGNAIT-ALTFAIYLLKPFWPSCDAPIEAVQLLAAAMICVLTLINCYNVKWV 186
                        ..||.|: .|...|.|..|     ....|.....|.|::.:||.:........
  Rat   127 SVARAWSSAFDNLIGNHISQTLKGTILLNMP-----HVLAEYPDFFALALVLLLTGLLVLGANES 186

  Fly   187 TRVTDIFTGTKVVALLVIVGAGVWWLFDGNTEHW--------------------DNPFSGGLQDP 231
            ..||.:|||..::.|..::.:|   ...|...:|                    |:..|||....
  Rat   187 GLVTKVFTGMNLLVLGFVIISG---FIKGELRNWKLTKEDYCLTMSESNGTCSLDSMGSGGFMPF 248

  Fly   232 GY------IALAFYSGLFSYSGWNYLNFVTEELKDPYRNLPKAICISMPVVTVIYM-----ITNI 285
            |.      .|..||    ::.|::.:....||.::|.|::|..|.||:.:..:.|.     :|.:
  Rat   249 GLEGILRGAATCFY----AFVGFDCIATTGEEAQNPQRSIPMGIVISLSICFLAYFGVSSALTLM 309

  Fly   286 AYFSVLSPDEILSSDAVAVTFGDKMLGYMSW-----IMPFAVACSTFGSLNGAIFASSRLFFVGA 345
            ..:..|.|:..|..   |.|       |:.|     ::.....|:...||.|::|...|:.:..|
  Rat   310 MPYYKLQPESPLPE---AFT-------YVGWEPARYLVAIGSLCALSTSLLGSMFPMPRVIYAMA 364

  Fly   346 RNGHLPAAISLINVNCLTPVPSLIFLGVLTLLLLFIEDVYVLINYVSYVEAL-FTLISVSGLLWM 409
            .:|.|...::.::....||:.:.:..||:...:.|:.::..|::.:|....| ::|:|:..|: :
  Rat   365 EDGLLFRVLARVHNGTHTPIVATVVSGVIAAFMAFLFELTDLVDLMSIGTLLAYSLVSICVLI-L 428

  Fly   410 RYKQP-------------KTERPIKVN-----------------LALPIIYL----------IVC 434
            || ||             :.||.::..                 |:..|:|:          ::|
  Rat   429 RY-QPDQEMKNGEEEVELQEERTLEAEKLTVQALFCQVDSIPTLLSGRIVYVCSSLLAVLLTVLC 492

  Fly   435 LFLVIFSCTQTP-----------YVVGIGTIIILSG---------------IPV--------YYL 465
            |.|..::   ||           .|:.:|.|:.:||               :||        .::
  Rat   493 LVLTWWT---TPLHSGDPVWVTVVVLILGLILGISGVIWRQPQNRTPLHFKVPVVPLLPLVSIFV 554

  Fly   466 TIHKPVKWLADTSQAINLW 484
            .::..::..|||.....:|
  Rat   555 NVYLMMQMTADTWARFGVW 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 129/592 (22%)
Slc7a3NP_058913.1 2A0303 4..591 CDD:273330 132/604 (22%)
AA_permease_C <551..589 CDD:290617 4/23 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351257
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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