DRSC/TRiP Functional Genomics Resources

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Protein Alignment mnd and SPCPB1C11.02

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_588425.1 Gene:SPCPB1C11.02 / 2539031 PomBaseID:SPCPB1C11.02 Length:505 Species:Schizosaccharomyces pombe


Alignment Length:514 Identity:118/514 - (22%)
Similarity:201/514 - (39%) Gaps:130/514 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VQASDSLIPRQVFEVPPAEPNNSTADSGSQGSGVKLKKQIGLLDGVAIIVGVIVGSGIFVSPKGV 68
            :.||.||:|                      .|..|.:.:.......:..|.|:|:|:|:.....
pombe     1 MDASVSLLP----------------------EGESLHRSLSASQIQMLAFGGIIGTGLFLGIGSS 43

  Fly    69 LKFSGSIGQSLIVWVLSGVLSMVGALCYAELGTMIPKSGGDYAYIGTAFGPLPAFLYLW------ 127
            |..||. ...||.:.:.||......|...|:...:|.:|....|:|.......:|...|      
pombe    44 LAESGP-ASLLISFSVLGVSVYCTMLALGEMSVYMPVAGSFCTYVGRYVDEALSFSLTWNYWLND 107

  Fly   128 -VAL--------LI----LVPT-GNAITALTFAIYLLKPFWPSCDAPIEAVQLLAAAMICVLTLI 178
             :||        |:    |:|| |:.::|     .|..|.|......|..:..|:|.:|..:..:
pombe   108 TIALASHVLATRLVVDFWLIPTEGDPVSA-----SLSLPPWKEAVRIITPITSLSANIILNMLPV 167

  Fly   179 NCYN--VKWVTRVTDIFTGTKVVALLVIVGAGVWWLFDGNTE-------HWDNP--FSGGLQDPG 232
            ..:.  ..|::.: .:||....:...::...||      |.|       :|.:|  |:.|:  .|
pombe   168 GGFGEIEYWLSSI-KVFTVAAFIVNGILCNLGV------NNEKKFIGFRYWKDPGAFNNGI--IG 223

  Fly   233 YIALAFYSGLFSYSGWNYLNFVTEELKDPYRNLPKAICISMPVVTVIYMIT------NIAYFSVL 291
            .|: :|.:..|:|:|...:.....|.|.|...|||||..:...|.::|:|:      |:.|   .
pombe   224 VIS-SFVNAAFAYAGTESIALTAGEAKSPITTLPKAIRFTAHRVLLLYIISVLVVGINLPY---N 284

  Fly   292 SPDEILSSDAVAV---TFGDKMLGY--MSWIMPFAVACSTFGSLNGAIFASSRLFFVGARNGHLP 351
            :|.  |..|:|.:   ||..|..|.  .:.||...:..|...:.|.:::|.:||.:..|::||.|
pombe   285 TPG--LDGDSVRMSPFTFVFKKFGVPGAASIMNLVILSSALSAGNHSLYAGTRLLYSLAKSGHAP 347

  Fly   352 AAISLINVNCLTPVPSLIFLGVLTLLLL----------FIEDVYVLINYVSYVEALFTLISVSGL 406
            ...|..|.:.: |..|::......:|.|          |:.:|..:.|.:|::     .|:||.|
pombe   348 KVFSKCNKHGI-PWLSVLATSATAILCLMSSQAGKTWGFLLNVIAVSNQISWI-----FIAVSSL 406

  Fly   407 LWMRYK-----QPKTERPIKVNLALPIIYLIVCLFLVIFSCTQTPYVVGIGTIIILSGI 460
               |::     |.||.|....|...|:                .||:     ||:|:|:
pombe   407 ---RFRKALRVQGKTHRLYFPNWTYPV----------------GPYI-----IILLNGV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 113/496 (23%)
SPCPB1C11.02NP_588425.1 2A0310 16..485 CDD:273334 111/477 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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