DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and AU018091

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001004153.2 Gene:AU018091 / 245128 MGIID:2142124 Length:684 Species:Mus musculus


Alignment Length:611 Identity:136/611 - (22%)
Similarity:232/611 - (37%) Gaps:187/611 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LIPRQVFEVPPAEPNNSTADSGSQGSGVK----------------------------LKKQIGLL 46
            |.||.....|...|  .:|:.||....:|                            |.:.:..|
Mouse    23 LCPRNTSSTPGFHP--VSAEFGSLHQALKMLWQNLHQFGQKLVRRRPLAANEQSESSLSRCLTTL 85

  Fly    47 DGVAIIVGVIVGSGIFVSPKGVLKFSGSI-----GQSLIV-WVLSGVLSMVGALCYAELGTMIPK 105
            |.|::.||..:|:|::|       .:|.:     |.|:|: ::::.:.|::..|||||.|..:|.
Mouse    86 DLVSLGVGSTLGAGVYV-------LAGEVAREKAGPSIIICFLIAALSSVMSGLCYAEFGARVPC 143

  Fly   106 SGGDYAYIGTAFGPLPAFLYLWVALLILV----------------PTGNAIT---ALTFAI---- 147
            ||..|.|.....|.|.||:..|..:|..|                ..||.|:   ..||.|    
Mouse   144 SGSAYLYSYVTVGQLLAFITGWNLILNYVIGAASVARAWSAAFDGLIGNHISQAMQTTFPIQVPS 208

  Fly   148 YLLKPFWPSCDAPIEAVQLLAAAMICVLTLINCYNVKWVTRVTDIFTGTKVVALLVIVGAGVWWL 212
            :|.|  :|         ...|..::.|||.|.....:....||.:|||   |.|||:....:..|
Mouse   209 FLAK--YP---------DFFALGLVIVLTGILALGARESALVTRVFTG---VNLLVLCFVSLSGL 259

  Fly   213 FDGNTEHWD-------------------NPF-SGGLQDPGY--IALAFYSGLFSYSGWNYLNFVT 255
            .:|...:|.                   .|. |||....|.  |.....:..|::.|::.:....
Mouse   260 INGKLHNWQLTEDDYKLALLESNNTDSLGPMGSGGFMPFGLKGILRGTATCFFAFIGFDCIASTG 324

  Fly   256 EELKDPYRNLPKAICISMPVVTVIY------MITNIAYF--SVLSPDEILSSDAVAVTFGDKMLG 312
            ||.:.|.|::|..|..|:.:..::|      :...|.|:  ::.||   |....:.|.:|...  
Mouse   325 EEARCPQRSIPLGIVTSLFICFLMYFGVSGALTLMIPYYQININSP---LPQAFIHVGWGPAR-- 384

  Fly   313 YMSWIMPFAVA----CSTFGSLNGAIFASSRLFFVGARNGHLPAAISLINVNCLTPVPSLIFLGV 373
                   :|||    |:...||.|:||...|:.:..|.:|.|...::.::....|||.:.:..|:
Mouse   385 -------YAVAVGTLCALSSSLIGSIFPVPRVVYSMAEDGLLFRKLAYVHPRTHTPVLATVLCGI 442

  Fly   374 LTLLLLFIEDVYVLINYVSYVEAL-FTLISVSGLLWMRY---------KQPKTE----------- 417
            :...:.|:.::..|::..|....| :||::.|.|: :||         |:.|:|           
Mouse   443 IAAFMAFLVELSDLVDLSSIGTLLAYTLVTFSVLI-LRYQPDQVLSSCKREKSESAAVELEPGLE 506

  Fly   418 -----RPIKV--------NLALP-----------IIY----------LIVCLFLVIFSCTQ---- 444
                 .||..        .|.:|           |:|          :::||.|..:| ||    
Mouse   507 PSSCMEPISPEGMPGIARTLCIPTNTTPTLRSGRIVYGCASLLVFLLMLLCLILTQWS-TQLFSG 570

  Fly   445 TPYVVGIGTIIILSGIPVYYLTIHKP 470
            .|.::.:...::|..:.|..:...:|
Mouse   571 DPVLIAMAASLLLLTVGVITVIWRQP 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 132/599 (22%)
AU018091NP_001004153.2 2A0303 53..656 CDD:273330 127/579 (22%)
AA_permease_C 604..654 CDD:290617
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847677
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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