DRSC/TRiP Functional Genomics Resources

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Protein Alignment mnd and F23F1.6

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_493642.1 Gene:F23F1.6 / 184903 WormBaseID:WBGene00017747 Length:583 Species:Caenorhabditis elegans


Alignment Length:524 Identity:114/524 - (21%)
Similarity:217/524 - (41%) Gaps:115/524 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QASDSLIPRQVFEVPPAEPNNSTADSGSQGSGVKLKKQIGLLDGVAIIVGVIVGSGIFVSPKGVL 69
            |.:|.|..::.|            |.||.... ::|:.:.:||.:.|.:|.::|:||:|....|:
 Worm     5 QIADVLFRKKTF------------DGGSHLES-QMKRCLTILDVMFIAIGHMIGAGIYVLTGSVV 56

  Fly    70 KFSGSIGQSLIV-WVLSGVLSMVGALCYAELGTMIPKSGGDYAYIGTAFGPLPAFLYLW-VALLI 132
            :  ...|.::|: ::.||..:::.|..|||.|...|::|..|.|.....|.:.||:..| |.|..
 Worm    57 R--NQAGPAIILSFIFSGFAALLSAFSYAEFGARFPRAGSAYTYSYVGMGEIWAFIVGWTVPLEY 119

  Fly   133 LVPTGNAITALTFAIYL---------------------------LKPFWPSCDAPIEAVQLLAAA 170
            ::  |||..|.:::.|.                           |.|            ..||..
 Worm   120 MI--GNAAVARSWSAYFDNLVSKSVSNWTLDTVGRLSDGKGFFALYP------------DFLAFF 170

  Fly   171 MICVLTLINCYNVKWVTRVTD--IFTGTKVVALLVIVGA-----GVW--WLFDGNTEHWDNPFSG 226
            ::.::.:......|:...|..  :|....|:|.::|.|.     .:|  ...||.::.    |..
 Worm   171 LLFLVAVAVAMGSKFSANVNTSFVFLNLAVLAFVIICGLTYADFSLWSGTYQDGRSKF----FPY 231

  Fly   227 GLQDPGYIALAFYSGLFSYSGWNYLNFVTEELKDPYRNLPKAICISMPVVTVIYMITNIAYFSVL 291
            |:|  |.|:.| .:..|::.|:..|....||.|:|:|.:|.|...|:.:::|||::.. |..:::
 Worm   232 GIQ--GAISGA-STCFFAFIGFEALATAGEEAKNPHRTIPLATFTSLAIISVIYVLMG-ASLTLM 292

  Fly   292 SPDEILSSDAV-AVTFGDKMLGYMSWIMPFAVACSTFGSLNGAIFASSRLFFVGARNGHLPAAIS 355
            .|.:::..||. |..|..|.......||..........:|....||..|..:..|.:|.:.....
 Worm   293 IPYDLVDPDAAFAAAFEMKGATVAKIIMSVGALAGMLNNLVTGSFALPRAVYAMADDGLIFGWFG 357

  Fly   356 LINVNCLTPVPSLIFLGVLTLLLLFIEDVYVLINYVSYVEAL-FTLISVSGLL------------ 407
            :||....||:.:.|...::..:|..:.|:..|::::|....| ::::|:..::            
 Worm   358 VINSKTKTPLNATIVFTIINAILALVFDLQALVDFLSIGTLLAYSMVSICVIILRHQSHLVDGSA 422

  Fly   408 -----------WMRYK--QPKTERPIKVNLALP-IIYLIVCLFLVIFSCTQTPYVVGI----GTI 454
                       |:.::  .......|.:.:|:. :|:..:||.:        |:..||    |.|
 Worm   423 TDYDNGGCLKSWVPFQGVWENFSEGISIRVAVAGLIFGYICLAI--------PFRTGIFSNAGGI 479

  Fly   455 IILS 458
            |:|:
 Worm   480 ILLT 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 110/507 (22%)
F23F1.6NP_493642.1 2A0303 1..560 CDD:273330 114/524 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

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