DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and aat-1

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_501707.1 Gene:aat-1 / 177793 WormBaseID:WBGene00000002 Length:493 Species:Caenorhabditis elegans


Alignment Length:486 Identity:232/486 - (47%)
Similarity:323/486 - (66%) Gaps:18/486 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PNNSTADSGSQGSGVKLKKQIGLLDGVAIIVGVIVGSGIFVSPKGVLKFSGSIGQSLIVWVLSGV 87
            |.|.|     :|.|..|:|.:.|.:||::|||.|:||||||||.||.:.:||:|.|||||::||:
 Worm    17 PQNET-----EGKGKGLEKSLTLFNGVSMIVGCIIGSGIFVSPTGVQEQAGSVGLSLIVWLISGI 76

  Fly    88 LSMVGALCYAELGTMIPKSGGDYAYIGTAFGPLPAFLYLWVALLILVPTGNAITALTFAIYLLKP 152
            .:.:||.|||||||:|.|||||||||..||||..||:.||:..:::.|....|.|||||||.|:|
 Worm    77 FTAIGAYCYAELGTLIKKSGGDYAYIMEAFGPFVAFIRLWIEAIVVRPCTVTIVALTFAIYGLRP 141

  Fly   153 FWPSCDAPIEAVQLLAAAMICVLTLINCYNVKWVTRVTDIFTGTKVVALLVIVGAGVWWLFDGNT 217
            |:|.|..|....:|||..:|.::|.|||.:|:..|.|.|.||..|||||.:|:..|:..||.|.:
 Worm   142 FFPDCAPPDVVAELLAILLIVLMTAINCISVRLATIVQDWFTIAKVVALCLIILTGLGLLFFGES 206

  Fly   218 EH---WDNPFSGGLQDPGYIALAFYSGLFSYSGWNYLNFVTEELKDPYRNLPKAICISMPVVTVI 279
            ::   ::|.|....||...::||||||||:|||||:|||:.|||::|.||||.||.||:...|||
 Worm   207 QYKDSFENIFENTSQDFTKVSLAFYSGLFAYSGWNFLNFIVEELQNPKRNLPLAIAISITSCTVI 271

  Fly   280 YMITNIAYFSVLSPDEILSSDAVAVTFGDKMLGYMSWIMPFAVACSTFGSLNGAIFASSRLFFVG 344
            |::||:|.::.:||||:|.|.||||.|.:|:.|..::|||..|||||.||.||.||.|:|||:.|
 Worm   272 YVLTNVALYTAISPDEMLESPAVAVLFANKLYGKFAFIMPLCVACSTIGSANGVIFTSARLFYSG 336

  Fly   345 ARNGHLPAAISLINVNCLTPVPSLIFLGVLTL-LLLFIEDVYVLINY--VSYVEALFTLISVSGL 406
            ||.|.:||.:::||....||:|::|..|.|:: .||..:|||.||||  :||..|:.|  :::.|
 Worm   337 AREGQMPAVLTMINKKTKTPIPAVILTGALSIAYLLASKDVYQLINYIQISYWLAIGT--AIAAL 399

  Fly   407 LWMRYKQPKTERPIKVNLALPIIYLIVCLFLVIFSCTQTPYVVGIGTIIILSGIPVYYLTI---H 468
            .|:|...|...|||||.|..|.|:|..|:.||:......|...|||.:|:||.:|||.:.|   :
 Worm   400 FWLRRTMPDASRPIKVPLIWPAIFLAGCIALVLIPMVAAPRDTGIGLLIMLSAVPVYGIFIGWKN 464

  Fly   469 KPVKWLADTSQAINLWCSKFFICMPNQEKFD 499
            || ||..:...:..::..|.|:.: :::|.|
 Worm   465 KP-KWFNEFIDSSTVFIQKLFMVV-DEDKED 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 230/481 (48%)
aat-1NP_501707.1 2A0308 2..491 CDD:273332 230/482 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D339093at33208
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100314
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 1 1.000 - - X75
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.760

Return to query results.
Submit another query.