DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnd and XB985134

DIOPT Version :9

Sequence 1:NP_524074.1 Gene:mnd / 39625 FlyBaseID:FBgn0002778 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_017950392.2 Gene:XB985134 / 100492274 XenbaseID:XB-GENE-985135 Length:503 Species:Xenopus tropicalis


Alignment Length:484 Identity:245/484 - (50%)
Similarity:343/484 - (70%) Gaps:21/484 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SGSQGSG----VKLKKQIGLLDGVAIIVGVIVGSGIFVSPKGVLKFSGSIGQSLIVWVLSGVLSM 90
            :|..|..    :::|::|.|.:||::|||.::||||||||||||.:|.|.|.|||:|.|.|:.||
 Frog    23 NGGPGKNEPEKMQMKQEITLFNGVSLIVGNMIGSGIFVSPKGVLMYSTSFGLSLIIWALGGMFSM 87

  Fly    91 VGALCYAELGTMIPKSGGDYAYIGTAFGPLPAFLYLWVALLILVPTGNAITALTFAIYLLKPFWP 155
            .||||||||||.:.|||..||||..|||...||:.||.:|||:.||..||.|:|||.|:::|.:.
 Frog    88 FGALCYAELGTSVIKSGASYAYILEAFGGFIAFIRLWSSLLIIEPTTQAIIAITFANYIVQPIFL 152

  Fly   156 SCDAPIEAVQLLAAAMICVLTLINCYNVKWVTRVTDIFTGTKVVALLVIVGAGVWWLFDGNTEHW 220
            ||..|..||:|:|||.||.||.|||.:|:|.|||.|:||..|::||::|:..|:..:..|.:::.
 Frog   153 SCQPPYAAVRLIAAACICTLTFINCVHVRWGTRVQDVFTYAKIMALIMIISVGLAKIVQGESDNL 217

  Fly   221 DNPFSGGLQDPGYIALAFYSGLFSYSGWNYLNFVTEELKDPYRNLPKAICISMPVVTVIYMITNI 285
            .|||.|...:.|.:||:.||.|:|||||:.|||||||:|.|.||||.||.|||||||:||::||:
 Frog   218 KNPFEGSTTNIGSMALSLYSALYSYSGWDTLNFVTEEMKHPERNLPLAIAISMPVVTIIYLLTNV 282

  Fly   286 AYFSVLSPDEILSSDAVAVTFGDKMLGYMSWIMPFAVACSTFGSLNGAIFASSRLFFVGARNGHL 350
            ||::||...::|:|||||||||:::|||..|::|.|||.|.:|.||.:|.|:||||:||||.|||
 Frog   283 AYYAVLDMPDVLASDAVAVTFGNEVLGYAKWLIPIAVAMSCYGGLNSSIIAASRLFYVGARQGHL 347

  Fly   351 PAAISLINVNCLTPVPSLIFLGVLTLLLLFIEDVYVLINYVSYVEALFTLISVSGLLWMRYKQPK 415
            ||::|||:|...||||:|:|.|::.:|.|.:|||::||||.|:...||..:||:||:.:|..||:
 Frog   348 PASLSLIHVENFTPVPALLFNGLIAILYLLVEDVFLLINYYSFSYWLFVGLSVAGLIVLRITQPQ 412

  Fly   416 TERPIKVNLALPIIYLIVCLFLVI--FSCTQTPYVVGIGTIIILSGIPVYYLTIHKPVK------ 472
            .|||:||||..|::|.:..||||.  ..|..|..::|||  |.|||||.::|.::.|.:      
 Frog   413 RERPVKVNLFFPVVYCLCSLFLVFVPIYCDTTNSLIGIG--IALSGIPTFFLGVYLPEEKRPKCF 475

  Fly   473 -WL-ADTSQAINLWCSKFFICMP--NQEK 497
             |: |..::.:.|.|:   .|:.  ::||
 Frog   476 AWICASITKYVQLLCN---CCLTDLDEEK 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mndNP_524074.1 2A0308 22..496 CDD:273332 243/481 (51%)
XB985134XP_017950392.2 2A0308 13..490 CDD:273332 241/468 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 456 1.000 Domainoid score I495
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D339093at33208
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 1 1.000 - - mtm9441
Panther 1 1.100 - - O PTHR11785
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X75
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.030

Return to query results.
Submit another query.