DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5114 and SQT1

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_012277.1 Gene:SQT1 / 854829 SGDID:S000001451 Length:431 Species:Saccharomyces cerevisiae


Alignment Length:473 Identity:105/473 - (22%)
Similarity:201/473 - (42%) Gaps:97/473 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DDGDDELQEIIELEEQ-PLD---EDDDDLEEVTLEQLEARLAMAGGDDDEEEDEEELRDRERIAA 73
            ::.:.|:...:|:|:. |:|   |:|||.|.:              :||||..|.::        
Yeast    11 EEVEQEIVPTVEVEQDVPVDIEGENDDDDEMM--------------NDDEEALEVDM-------- 53

  Fly    74 ITDEATVTFKKHTAPVFACSLHPNYNWAVTGSEDDRAFVWETSTGDVLY--EITEHKDTVTETHF 136
             ::.:...|.|||..|||...|||.....||..|:.|.:|.:.:....:  .:|.:.::|....|
Yeast    54 -SNNSLTYFDKHTDSVFAIGHHPNLPLVCTGGGDNLAHLWTSHSQPPKFAGTLTGYGESVISCSF 117

  Fly   137 SHDGVYLATGDLAGDLFVFKVSEKHDERPILTKIWEYSMSDMSWLFWH-RAAHILLAGSDSGEVF 200
            :.:|.:|.|.|::|.:.|....:...:..:.:::.|  :.::.||..| ..|.....|:..|.|:
Yeast   118 TSEGGFLVTADMSGKVLVHMGQKGGAQWKLASQMQE--VEEIVWLKTHPTIARTFAFGATDGSVW 180

  Fly   201 VFRIPSGEC---KILPG--QSSRCESGELSGDGK-----KLFTAYVNGSVKLWDLKSCQVLIDVN 255
            .::|...:.   :::.|  ....|..||.....|     :|.|..::.::..|:..:.|.|..:.
Yeast   181 CYQINEQDGSLEQLMSGFVHQQDCSMGEFINTDKGENTLELVTCSLDSTIVAWNCFTGQQLFKIT 245

  Fly   256 ESHPMGFGEITHAVVACERESPFYVCAEA--------SGECSSGKGIRYNTSFHNKTIRKMLFCT 312
            ::...|.            |:|:...:.|        ||..:.|.         |..:..::.|.
Yeast   246 QAEIKGL------------EAPWISLSLAPETLTKGNSGVVACGS---------NNGLLAVINCN 289

  Fly   313 NNGPV---STI--------QSEHGIECLAFAPSSADLKLFACGSLDGRISIWDYAKSALRTICEN 366
            |.|.:   ||:        :.:..||.:::   |:...|.|.|.:.|.|.::|  .||.| :...
Yeast   290 NGGAILHLSTVIELKPEQDELDASIESISW---SSKFSLMAIGLVCGEILLYD--TSAWR-VRHK 348

  Fly   367 PVPNDAVIRIKWLNDHTILAATSQGNLNAFDARTGILKFTLTGHYYHIYEFVY--------KPQE 423
            .|..|:|.::.:.|| .:.|:...|.:..|:||||..||...||...:.:|:.        ..|:
Yeast   349 FVLEDSVTKLMFDND-DLFASCINGKVYQFNARTGQEKFVCVGHNMGVLDFILLHPVANTGTEQK 412

  Fly   424 NLLLTVSEDNTAKIFKVP 441
            ..::|..::..:.:|:||
Yeast   413 RKVITAGDEGVSLVFEVP 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369 87/399 (22%)
WD40 <81..441 CDD:225201 88/399 (22%)
WD40 repeat 89..126 CDD:293791 11/38 (29%)
WD40 repeat 132..170 CDD:293791 7/37 (19%)
WD40 repeat 175..213 CDD:293791 8/41 (20%)
WD40 repeat 220..299 CDD:293791 15/91 (16%)
WD40 repeat 266..321 CDD:293791 12/73 (16%)
WD40 repeat 326..365 CDD:293791 12/38 (32%)
WD40 repeat 373..408 CDD:293791 12/34 (35%)
WD40 repeat 414..438 CDD:293791 3/31 (10%)
SQT1NP_012277.1 WD40 51..>392 CDD:225201 83/379 (22%)
WD40 repeat 68..107 CDD:293791 11/38 (29%)
WD40 repeat 113..162 CDD:293791 10/50 (20%)
WD40 repeat 179..245 CDD:293791 12/65 (18%)
WD40 repeat 257..307 CDD:293791 10/58 (17%)
WD40 repeat 314..350 CDD:293791 12/41 (29%)
WD40 repeat 355..391 CDD:293791 12/36 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345659
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0296
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I1562
Isobase 1 0.950 - 0 Normalized mean entropy S3098
OMA 1 1.010 - - QHG53955
OrthoFinder 1 1.000 - - FOG0003404
OrthoInspector 1 1.000 - - oto99755
orthoMCL 1 0.900 - - OOG6_100610
Panther 1 1.100 - - LDO PTHR19857
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1794
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.740

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