DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5114 and RSA4

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_009997.2 Gene:RSA4 / 850435 SGDID:S000000668 Length:515 Species:Saccharomyces cerevisiae


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369
WD40 <81..441 CDD:225201
WD40 repeat 89..126 CDD:293791
WD40 repeat 132..170 CDD:293791
WD40 repeat 175..213 CDD:293791
WD40 repeat 220..299 CDD:293791
WD40 repeat 266..321 CDD:293791
WD40 repeat 326..365 CDD:293791
WD40 repeat 373..408 CDD:293791
WD40 repeat 414..438 CDD:293791
RSA4NP_009997.2 NLE 32..>79 CDD:400462
WD40 135..472 CDD:238121
WD40 repeat 189..227 CDD:293791
WD40 repeat 233..276 CDD:293791
WD40 repeat 281..316 CDD:293791
WD40 repeat 324..399 CDD:293791
WD40 repeat 405..441 CDD:293791
WD40 repeat 447..483 CDD:293791
WD40 475..513 CDD:197651
WD40 repeat 489..513 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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