DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5114 and sprb

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001122262.1 Gene:sprb / 795445 ZFINID:ZDB-GENE-070719-1 Length:272 Species:Danio rerio


Alignment Length:328 Identity:60/328 - (18%)
Similarity:96/328 - (29%) Gaps:115/328 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 ELRDRERIAAITDEATVTFKKHTAPVFACSLHPNYNWAVTGSEDDRAFVWETSTGDVLYEITEHK 128
            |.||..|...:...|:..:.:..|...:|.|.|.           ...:..:.|.|.|.::   |
Zfish     8 ERRDLGRAVCVVTGASKGYGRTLALQISCLLKPR-----------SVLLLVSRTADQLNQL---K 58

  Fly   129 DTVTETHFSHDGVYLATGDLAGDLFVFKVSEKHDERPILTKIWEYSMSDMSWLFWHRAAHILLAG 193
            ..:...|.:|..:.|                  |.|.:...:.|                     
Zfish    59 QDIVSLHAAHTDLQL------------------DVRCVQADLQE--------------------- 84

  Fly   194 SDSGEVFVFRIPSGECKILPGQSSRCESGELSGDGKKLFTAYVNGSVKLWDLKSCQVLIDVNESH 258
                       |.|..|.:  |.:|   ..||.|.:.|.  .:|.:..|.|:..|.|        
Zfish    85 -----------PDGVQKTI--QETR---NTLSTDIEHLL--IINNAASLGDVSRCAV-------- 123

  Fly   259 PMGFGEITHAVVACERESPFYVCAEASGECSSGKGI-----------RYNTSFHNKTIRK----- 307
              .|.:      .||...  |:....||..|...||           |...:..:....|     
Zfish   124 --SFTD------PCEVSR--YLALNVSGVLSLTAGILQAFPPAVGLRRTVVNISSLCALKPFPSW 178

  Fly   308 MLFCTNNGPVSTI-----QSEHGIECLAFAPS--SADLKLFA-C--GSLDGRISIWDYAKSALRT 362
            :|:||.......:     :.|..:..|::||.  ..|::|.| |  |:::.|.|...........
Zfish   179 VLYCTGKAARDMMFRVLAEEEPDLRVLSYAPGPLDTDMQLQARCFSGNVELRRSFSSMFSDGQLL 243

  Fly   363 ICE 365
            .||
Zfish   244 SCE 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369 55/313 (18%)
WD40 <81..441 CDD:225201 55/311 (18%)
WD40 repeat 89..126 CDD:293791 6/36 (17%)
WD40 repeat 132..170 CDD:293791 5/37 (14%)
WD40 repeat 175..213 CDD:293791 3/37 (8%)
WD40 repeat 220..299 CDD:293791 19/89 (21%)
WD40 repeat 266..321 CDD:293791 13/75 (17%)
WD40 repeat 326..365 CDD:293791 10/43 (23%)
WD40 repeat 373..408 CDD:293791
WD40 repeat 414..438 CDD:293791
sprbNP_001122262.1 SPR-like_SDR_c 16..271 CDD:187625 56/320 (18%)
adh_short 16..217 CDD:278532 48/289 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100610
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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