DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5114 and Katnb1

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_083081.2 Gene:Katnb1 / 74187 MGIID:1921437 Length:658 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369
WD40 <81..441 CDD:225201
WD40 repeat 89..126 CDD:293791
WD40 repeat 132..170 CDD:293791
WD40 repeat 175..213 CDD:293791
WD40 repeat 220..299 CDD:293791
WD40 repeat 266..321 CDD:293791
WD40 repeat 326..365 CDD:293791
WD40 repeat 373..408 CDD:293791
WD40 repeat 414..438 CDD:293791
Katnb1NP_083081.2 Interaction with centrosomes. /evidence=ECO:0000250 1..300
Interaction with dynein 1..284
WD40 7..257 CDD:238121
WD40 repeat 67..103 CDD:293791
WD40 repeat 108..144 CDD:293791
WD40 repeat 151..186 CDD:293791
WD40 repeat 192..228 CDD:293791
WD40 repeat 234..261 CDD:293791
Interaction with PAFAH1B1. /evidence=ECO:0000269|PubMed:16203747 285..437
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 311..419
MARCKS <367..465 CDD:366900
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 434..458
Interaction with KATNA1 and NDEL1. /evidence=ECO:0000269|PubMed:16203747 436..658
Katanin_con80 500..651 CDD:372820
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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