| Sequence 1: | NP_001246760.1 | Gene: | CG5114 / 39624 | FlyBaseID: | FBgn0036460 | Length: | 445 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_071799.2 | Gene: | Mlst8 / 64226 | RGDID: | 69242 | Length: | 326 | Species: | Rattus norvegicus |
| Alignment Length: | 235 | Identity: | 53/235 - (22%) |
|---|---|---|---|
| Similarity: | 88/235 - (37%) | Gaps: | 56/235 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 46 EARLAMAGGDDDEEEDEEELRDR----ERIAAITDEATVTFKKHTAPVFACSLHPNYNWAVTGSE 106
Fly 107 DDRAFVWETSTGDVLYEITEHKDTVTETHFSHDGVYLATGDLAGDLFVFKVSEK-HDERPIL--- 167
Fly 168 TKIWEYSMSDMSWLFWHRAAHILLAGSDSGEVFVFRIPSGECKIL-----------------PGQ 215
Fly 216 SSR-----CESGELSGDGKKLFTAYVNGSVKLWDLKSCQV 250 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG5114 | NP_001246760.1 | WD40 | 79..439 | CDD:295369 | 44/198 (22%) |
| WD40 | <81..441 | CDD:225201 | 44/196 (22%) | ||
| WD40 repeat | 89..126 | CDD:293791 | 8/36 (22%) | ||
| WD40 repeat | 132..170 | CDD:293791 | 13/41 (32%) | ||
| WD40 repeat | 175..213 | CDD:293791 | 5/54 (9%) | ||
| WD40 repeat | 220..299 | CDD:293791 | 7/31 (23%) | ||
| WD40 repeat | 266..321 | CDD:293791 | |||
| WD40 repeat | 326..365 | CDD:293791 | |||
| WD40 repeat | 373..408 | CDD:293791 | |||
| WD40 repeat | 414..438 | CDD:293791 | |||
| Mlst8 | NP_071799.2 | WD 1 | 1..37 | ||
| WD40 | 14..297 | CDD:238121 | 51/226 (23%) | ||
| WD 2 | 40..80 | ||||
| WD40 repeat | 47..83 | CDD:293791 | |||
| WD 3 | 83..122 | 7/26 (27%) | |||
| WD40 repeat | 89..127 | CDD:293791 | 9/31 (29%) | ||
| WD 4 | 126..165 | 9/49 (18%) | |||
| WD40 repeat | 131..167 | CDD:293791 | 7/35 (20%) | ||
| WD 5 | 168..207 | 11/38 (29%) | |||
| WD40 repeat | 174..217 | CDD:293791 | 14/42 (33%) | ||
| WD 6 | 218..257 | 5/49 (10%) | |||
| WD40 repeat | 224..258 | CDD:293791 | 5/44 (11%) | ||
| WD 7 | 268..309 | 11/40 (28%) | |||
| WD40 repeat | 273..299 | CDD:293791 | 8/28 (29%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG53955 | |
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.010 | |||||