DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5114 and nwd2

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_690801.5 Gene:nwd2 / 562320 -ID:- Length:1747 Species:Danio rerio


Alignment Length:480 Identity:95/480 - (19%)
Similarity:160/480 - (33%) Gaps:169/480 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RDNTPPH-RPDFD-DGDDELQEIIELEEQPLDEDDDDL---EEVTLEQLEARL-AMAGGDDDEEE 60
            :|.|.|. ..|:| .|||  .|::.:|   |.||...:   :..::|.|:.:: .||        
Zfish  1195 KDITNPKLMEDYDCRGDD--SEVVGIE---LSEDQRSILICKARSIEVLDTKIWKMA-------- 1246

  Fly    61 DEEELRDRERIAAITDEATVTFKKHTAPVFACSLHPNYNWAVTGSEDDRA-FVWETSTGDVLYEI 124
                    |:..|          |.|....|..|..|....:...|:..: |||...:|..:..:
Zfish  1247 --------EKFKA----------KRTEKFVAAVLSKNSQSIIASMENTSSIFVWRRDSGQCMASL 1293

  Fly   125 TEHKDTVTE----TH------FSHDGVYLA--------------TG------DLAG-DLFVFKVS 158
            .|....:.:    ||      .:..||...              ||      .|:| :.||:.: 
Zfish  1294 IEISGAIVKLIKSTHHNLLLSVASSGVLSVWDIDIITAMSNIDKTGKPIQILQLSGREDFVYTM- 1357

  Fly   159 EKHDERPILTKIWEYSMSDMSWLFWHR----------AAHILLAGSDSGEVFVFRIPSGECKI-L 212
               |...::.| |.||...:..:|.|.          :..:::...|....:::...:||... :
Zfish  1358 ---DGSEVIHK-WNYSTGFIEMVFKHEGLVENCVLTTSGDLMVTSDDKSSQYIWHTTTGENIFRI 1418

  Fly   213 PGQS--------------SRCESGELSGDGKKLFTAYVNGSVKLWDL----KSCQVLIDVNESHP 259
            .||.              |.||.               |.| ::|.|    |.|.:|:       
Zfish  1419 NGQKISQLLITHNDQFVVSLCEQ---------------NAS-RVWRLATGHKVCNILV------- 1460

  Fly   260 MGFGEITHAVVACERESPFYVCAEASGECSSGKGIRYNTSFHNKTIRKMLFCTNNGPVSTIQSEH 324
                .:.||::.  ..:.|.|        .:.|......|..:.::.|...|           :.
Zfish  1461 ----TLQHALIT--TANTFLV--------GANKNKLLAVSLWSGSVSKKFIC-----------DD 1500

  Fly   325 GIECLAF--APSSADLKLFACGSLDGRISIWDYAKSALRTICEN-PVPNDAVIRIKWLNDHTI-- 384
            ||..:.|  .|.|.|..:|...:  ..:.||..|.   .::|.. .:||:.   :|.|.|..|  
Zfish  1501 GITIVNFKLIPDSPDFVVFITST--ETVFIWSVAD---ESVCRRVQLPNNF---LKNLEDFQISP 1557

  Fly   385 ---LAATSQG--NLNAFDARTGILK 404
               |...|:|  |:|..|..:|.|:
Zfish  1558 NGKLGIVSKGDENINVLDLHSGKLR 1582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369 76/397 (19%)
WD40 <81..441 CDD:225201 76/395 (19%)
WD40 repeat 89..126 CDD:293791 8/37 (22%)
WD40 repeat 132..170 CDD:293791 11/68 (16%)
WD40 repeat 175..213 CDD:293791 5/48 (10%)
WD40 repeat 220..299 CDD:293791 13/82 (16%)
WD40 repeat 266..321 CDD:293791 8/54 (15%)
WD40 repeat 326..365 CDD:293791 9/40 (23%)
WD40 repeat 373..408 CDD:293791 12/39 (31%)
WD40 repeat 414..438 CDD:293791
nwd2XP_690801.5 AAA_16 402..537 CDD:289934
WD40 999..1325 CDD:295369 34/160 (21%)
WD40 repeat 1033..1071 CDD:293791
WD40 1123..1507 CDD:225201 72/395 (18%)
WD40 repeat 1125..1163 CDD:293791
WD40 repeat 1168..1204 CDD:293791 3/8 (38%)
WD40 repeat 1216..1255 CDD:293791 11/67 (16%)
WD40 repeat 1258..1294 CDD:293791 8/35 (23%)
WD40 1278..1603 CDD:295369 70/366 (19%)
WD40 repeat 1300..1346 CDD:293791 6/45 (13%)
WD40 repeat 1387..1407 CDD:293791 1/19 (5%)
WD40 repeat 1423..1463 CDD:293791 10/66 (15%)
WD40 repeat 1470..1492 CDD:293791 4/29 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592954
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.030

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