DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5114 and daw1

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001037817.1 Gene:daw1 / 556760 ZFINID:ZDB-GENE-050419-255 Length:418 Species:Danio rerio


Alignment Length:442 Identity:94/442 - (21%)
Similarity:170/442 - (38%) Gaps:97/442 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DFDDGDDELQEIIELEEQPLDEDDDDLEEVTLEQLEARLAMAGGDDDEEEDEEELRDRERIAAIT 75
            |::.|.....:.|:|...   ..:.|:||:.|| :.|...:......|:......:.:|:::...
Zfish    18 DYEKGGQLRTKCIDLLNL---TPETDVEELVLE-IRAAEPLITSSCVEQVKLLICKLQEKVSQKD 78

  Fly    76 DEATVTFK---KHTAPVFACSLHPNYNWAVTGSEDDRAFVWETSTGDVLYEITEHKDTVTETHFS 137
            :.....|:   .|..|:...:.:.:.:..:|||.|....:|:|::|:.|:.:..|::.|....|:
Zfish    79 ERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFN 143

  Fly   138 HD-GVYLATGDLAGDLFVFKVSEKHDERPILTKIWEYSMSDMSWLFWHRAAHILLAGSDSGEVF- 200
            :. |..:|||..             |:   ..|:|                     .:::|:.| 
Zfish   144 NPYGDKVATGSF-------------DK---TCKLW---------------------SAETGKCFY 171

  Fly   201 VFRIPSGE--CKILPGQSSRCESGELSGDGKKLFTAYVNGSVKLWDLKSCQVLIDVNESHPMGFG 263
            .||..:.|  |.....||:...:|.:            :.:.||||::|.:. :.....|   |.
Zfish   172 TFRGHTAEIVCLAFNPQSTLVATGSM------------DTTAKLWDVESGEE-VSTLAGH---FA 220

  Fly   264 EITHAVVACERESPFYVCAEASGECSSGKGIRYNT-SFHNKTIRKMLFCTNNGPVSTIQSEH--G 325
            ||            ..:|...:|:       |..| ||.:..|   |:...:|....:.|.|  .
Zfish   221 EI------------ISLCFNTTGD-------RLVTGSFDHTAI---LWDVPSGRKVHVLSGHRGE 263

  Fly   326 IECLAFAPSSADLKLFACGSLDGRISIWD-YAKSALRTICENPVPNDAVIRIKW-LNDHTILAAT 388
            |.|:.|   :.|..|.|..|||....:|| .....|.|:..:   ||.|:.:.: .....|..|:
Zfish   264 ISCVQF---NWDCSLIATASLDKSCKVWDAEGGQCLATLLGH---NDEVLDVCFNYTGQLIATAS 322

  Fly   389 SQGNLNAFDARTGILKFTLTGHYYHIYEFVYKPQENLLLTVSEDNTAKIFKV 440
            :.|....|...|......|.||...|.:..:..|.:.:||.|.|.|::::.|
Zfish   323 ADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCV 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369 81/371 (22%)
WD40 <81..441 CDD:225201 82/372 (22%)
WD40 repeat 89..126 CDD:293791 8/36 (22%)
WD40 repeat 132..170 CDD:293791 6/38 (16%)
WD40 repeat 175..213 CDD:293791 6/40 (15%)
WD40 repeat 220..299 CDD:293791 14/79 (18%)
WD40 repeat 266..321 CDD:293791 9/55 (16%)
WD40 repeat 326..365 CDD:293791 13/39 (33%)
WD40 repeat 373..408 CDD:293791 6/35 (17%)
WD40 repeat 414..438 CDD:293791 7/23 (30%)
daw1NP_001037817.1 CEP19 4..>81 CDD:291594 12/66 (18%)
WD40 84..372 CDD:238121 81/368 (22%)
WD40 88..405 CDD:225201 81/368 (22%)
WD 1 90..129 10/38 (26%)
WD40 repeat 95..132 CDD:293791 8/36 (22%)
WD 2 132..172 12/76 (16%)
WD40 repeat 137..175 CDD:293791 12/74 (16%)
WD 3 175..214 10/51 (20%)
WD40 repeat 181..217 CDD:293791 9/48 (19%)
WD 4 217..256 13/63 (21%)
WD40 repeat 222..258 CDD:293791 10/57 (18%)
WD 5 259..298 13/41 (32%)
WD40 repeat 265..300 CDD:293791 12/37 (32%)
WD 6 301..340 8/41 (20%)
WD40 repeat 306..342 CDD:293791 6/35 (17%)
WD 7 343..384 10/32 (31%)
WD40 repeat 348..384 CDD:293791 8/27 (30%)
WD40 376..>405 CDD:197651
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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