DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5114 and wdr61

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_988871.1 Gene:wdr61 / 394466 XenbaseID:XB-GENE-5751496 Length:305 Species:Xenopus tropicalis


Alignment Length:239 Identity:62/239 - (25%)
Similarity:95/239 - (39%) Gaps:64/239 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 GELSGDGKKLFTAYVNGS----VKLWDLKSCQV-LIDVNESHPMGFGEITHAVVACERESPFYVC 281
            |:.|.||.:|   .::||    ||:|.....:: |....|.|.:|       ||:.:......:.
 Frog    25 GKNSNDGSEL---VISGSLDDLVKVWKWSDERLELQSTLEGHQLG-------VVSVDVSPSGNIM 79

  Fly   282 AEAS-------GECSSGKGIRYNTSFHNKTIRKMLFCTNNGPVSTIQSEHGIECLAFAPSSADLK 339
            |.:|       .:..|||.||               ..:.|||....       :||:|.|..| 
 Frog    80 ASSSLDAHIRLWDLESGKQIR---------------AIDAGPVDAWS-------VAFSPDSQHL- 121

  Fly   340 LFACGSLDGRISIW-------DYAKSALRTICENPVPNDAVIRIKWLNDHTILAATS-QGNLNAF 396
              |.||..|:::|:       :|:..         .....::.|.:..|...||:.: .|.:|.|
 Frog   122 --ATGSHVGKVNIFGVETGKKEYSLD---------TRGKFILSIAYSPDGKYLASGAIDGIINIF 175

  Fly   397 DARTGILKFTLTGHYYHIYEFVYKPQENLLLTVSEDNTAKIFKV 440
            |..||.|..||.||...|....:.|...||:|.|:|...||::|
 Frog   176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEV 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369 61/236 (26%)
WD40 <81..441 CDD:225201 62/239 (26%)
WD40 repeat 89..126 CDD:293791
WD40 repeat 132..170 CDD:293791
WD40 repeat 175..213 CDD:293791
WD40 repeat 220..299 CDD:293791 23/88 (26%)
WD40 repeat 266..321 CDD:293791 12/61 (20%)
WD40 repeat 326..365 CDD:293791 11/45 (24%)
WD40 repeat 373..408 CDD:293791 12/35 (34%)
WD40 repeat 414..438 CDD:293791 8/23 (35%)
wdr61NP_988871.1 WD 1 14..57 10/34 (29%)
WD40 15..302 CDD:238121 62/239 (26%)
WD40 repeat 19..62 CDD:293791 11/39 (28%)
WD 2 62..101 11/60 (18%)
WD40 repeat 68..105 CDD:293791 8/51 (16%)
WD 3 104..143 13/48 (27%)
WD40 repeat 110..145 CDD:293791 11/44 (25%)
WD 4 146..187 12/40 (30%)
WD40 repeat 152..187 CDD:293791 12/34 (35%)
WD 5 188..227 12/32 (38%)
WD40 repeat 193..229 CDD:293791 10/27 (37%)
WD 6 230..269
WD40 repeat 235..272 CDD:293791
WD 7 272..305
WD40 repeat 277..301 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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