DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5114 and Sptr

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_727265.1 Gene:Sptr / 31781 FlyBaseID:FBgn0014032 Length:261 Species:Drosophila melanogaster


Alignment Length:213 Identity:44/213 - (20%)
Similarity:68/213 - (31%) Gaps:69/213 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 DLEEVTLEQLEARLAMAGGDDDEEEDEEELRDRERIAAITDEATV--TFKK-------------- 84
            :||....|.....|..:||.:          :.||...|.:..||  |.|:              
  Fly    69 ELETAKTEDFTKILEASGGKN----------NFERAIVIHNAGTVGDTSKRAKEIGDTDFLQRYY 123

  Fly    85 HTAPVFACSLHPNYNWAVTGSEDDRAFVWETSTGDVLYEITE--HKDTV---TETHFSHDGVYLA 144
            |:....|.||:..:.....|..   ..|...||...:..|:.  |..||   .|.:|.    .||
  Fly   124 HSNVFSAISLNCEFMRVFKGIP---KLVVNLSTLAAIAPISSMAHYCTVKAAREMYFR----VLA 181

  Fly   145 TGDLAGDLFVFKVS--------------EKHDERPILTKIWEYSMSDMSWLFWHRAAHILLAGSD 195
            |.:.|.|..|...:              |.||  |.:..::..          .|.:..:|..:.
  Fly   182 TEESAEDTLVLNYAPGVIDTQMTVQVQREAHD--PAVVAMFRE----------QRESKTMLTPAQ 234

  Fly   196 SGEVFV-----FRIPSGE 208
            :.|.|:     |:..||:
  Fly   235 TTERFIKVLEAFKFKSGD 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369 35/170 (21%)
WD40 <81..441 CDD:225201 33/166 (20%)
WD40 repeat 89..126 CDD:293791 8/36 (22%)
WD40 repeat 132..170 CDD:293791 12/51 (24%)
WD40 repeat 175..213 CDD:293791 7/39 (18%)
WD40 repeat 220..299 CDD:293791
WD40 repeat 266..321 CDD:293791
WD40 repeat 326..365 CDD:293791
WD40 repeat 373..408 CDD:293791
WD40 repeat 414..438 CDD:293791
SptrNP_727265.1 sepiapter_red 7..258 CDD:273660 44/213 (21%)
adh_short 10..204 CDD:278532 33/151 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100610
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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