DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5114 and Tbl1x

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001100434.1 Gene:Tbl1x / 302711 RGDID:1563868 Length:527 Species:Rattus norvegicus


Alignment Length:400 Identity:82/400 - (20%)
Similarity:135/400 - (33%) Gaps:129/400 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 EATVTFKKHTAPVFACSLHPNYNWAVTGSEDDRAFVW---ETSTGD----VL--------YEITE 126
            :||| .:.|.:.||.|:.:|..:...:||.|..|.:|   |.|.|.    ||        :::..
  Rat   174 KATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 237

  Fly   127 HKDTVTETHFSHDGVYLATGDLAGDLFVFKVSEKHDERPILTKIWEYSMSDMSWLFWHRAAHILL 191
            :|| ||...::.||..||||...|                ..:||....:..|.|          
  Rat   238 NKD-VTSLDWNSDGTLLATGSYDG----------------FARIWTEDGNLASTL---------- 275

  Fly   192 AGSDSGEVFVFRIPSGECKILPGQSSRCESGELSGDGKKLFTAYVNGSVKLWDLKSCQV------ 250
             |...|.:|..:                    .:..|..:.:|.|:.:..:||..:.:.      
  Rat   276 -GQHKGPIFALK--------------------WNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPF 319

  Fly   251 ----LIDVNESHPMGFGEITHAVVACERESPFYVCAEASGECSSGKGIRYNTSFHNKTIRKMLFC 311
                .:||:..:...|       .:|..:...:||                          .|.|
  Rat   320 HSAPALDVDWQNNTTF-------ASCSTDMCIHVC--------------------------RLGC 351

  Fly   312 TNNGPVSTIQSE-HGIECLAFAPSSADLKLFACGSLDGRISIWDYAKSALRTICENPVP--NDAV 373
              :.||.|.|.. :.:..:.:.||.   .|.|..|.|..:.||...:.|    |.:.:.  :..:
  Rat   352 --DRPVKTFQGHTNEVNAIKWDPSG---MLLASCSDDMTLKIWSMKQDA----CVHDLQAHSKEI 407

  Fly   374 IRIKWL---------NDHTILAATS-QGNLNAFDARTGILKFTLTGHYYHIYEFVYKPQENLLLT 428
            ..|||.         |.:.:||:.| ...:..:|...|:...|||.|...:|...:.|....|.:
  Rat   408 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLAS 472

  Fly   429 VSEDNTAKIF 438
            .|.|....|:
  Rat   473 GSFDKCVHIW 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369 81/397 (20%)
WD40 <81..441 CDD:225201 79/395 (20%)
WD40 repeat 89..126 CDD:293791 14/51 (27%)
WD40 repeat 132..170 CDD:293791 8/37 (22%)
WD40 repeat 175..213 CDD:293791 5/37 (14%)
WD40 repeat 220..299 CDD:293791 11/88 (13%)
WD40 repeat 266..321 CDD:293791 8/54 (15%)
WD40 repeat 326..365 CDD:293791 9/38 (24%)
WD40 repeat 373..408 CDD:293791 10/44 (23%)
WD40 repeat 414..438 CDD:293791 5/23 (22%)
Tbl1xNP_001100434.1 LisH 7..31 CDD:369916
WD40 177..483 CDD:238121 80/396 (20%)
WD40 repeat 185..232 CDD:293791 14/46 (30%)
WD40 repeat 242..277 CDD:293791 12/61 (20%)
WD40 repeat 282..318 CDD:293791 6/55 (11%)
WD40 repeat 325..359 CDD:293791 11/68 (16%)
WD40 repeat 365..401 CDD:293791 10/42 (24%)
WD40 repeat 407..452 CDD:293791 10/44 (23%)
WD40 repeat 458..482 CDD:293791 5/23 (22%)
WD40 repeat 499..525 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.