DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5114 and Aamp

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001177373.1 Gene:Aamp / 227290 MGIID:107809 Length:436 Species:Mus musculus


Alignment Length:466 Identity:138/466 - (29%)
Similarity:224/466 - (48%) Gaps:75/466 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NTPPHRPDFDDGDDELQEIIELEEQPLDEDDD---DLEEVTLEQLEARLAMAGGDDDEEEDEEE- 64
            :|||.......||:|:.|::||:..|.|..||   ::|:|..|:          :::|||..:| 
Mouse    12 DTPPLETLSFHGDEEIIEVVELDPGPPDPADDLAQEMEDVDFEE----------EEEEEEGNDEG 66

  Fly    65 --LRDRERIAAI---TDEATVTFKKHTAPVFACSLHPNYN-WAVTGSEDDRAFVWETSTGDVLYE 123
              |..:|.:...   .|::.|||..|:|.||..||.|..| .||||.|||:||||....|::|:|
Mouse    67 WVLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLGDGELLFE 131

  Fly   124 ITEHKDTVTETHFSHDGVYLATGDLAGDLFVFKVSEKHDERPILTKIWEYSMSDMSWLFWHRAAH 188
            ...|||:||...||||...:||||::|.|.|::|..|.:       :|.:...|:.|:.||..|.
Mouse   132 CAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEE-------VWSFEAGDLEWMEWHPRAP 189

  Fly   189 ILLAGSDSGEVFVFRIPSGECKILPGQSSRCESGELSGDGKKLFTAYVNGSVKLWDLKSCQVL-- 251
            :||||:..|..:::::|:|:||...|.:.....|.:..|||:....|.:|::::||||....:  
Mouse   190 VLLAGTADGNTWMWKVPNGDCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNPIHV 254

  Fly   252 IDVNESHPMGFGEITHAVVACERESPFYVCAEASGECSSGKGIRYNTSFHNKTIRKMLFCTNNGP 316
            :...|.|.   |.:|  .||..::....:  ..|.:|.:                |::..|....
Mouse   255 LKGTEGHQ---GPLT--CVATNQDGSLIL--TGSVDCQA----------------KLVSATTGKV 296

  Fly   317 VSTIQSE----------------HGIECLAFAPSSADLKLFACGSLDGRISIWDYAKSALRTICE 365
            |...:.|                :.:|.|.|.   :.:.|.|.|.|||.::|:|.:...||..|:
Mouse   297 VGVFRPETVASQPSLGEGEESESNSVESLGFC---SVMPLAAVGYLDGTLAIYDLSTQTLRHQCQ 358

  Fly   366 NPVPNDAVIRIKW-LNDHTILAATSQGNLNAFDARTGILKFTLTGHYYHIYEFVYKPQENLLLTV 429
            :   ...::::.| .....:...:..|.:..:|||||.|.....||...|.:|......:|::|.
Mouse   359 H---QSGIVQLLWEAGTAVVYTCSLDGVVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTT 420

  Fly   430 SEDNTAKIFKV 440
            |.|:.||:|.|
Mouse   421 SGDHKAKVFCV 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369 113/379 (30%)
WD40 <81..441 CDD:225201 114/380 (30%)
WD40 repeat 89..126 CDD:293791 20/37 (54%)
WD40 repeat 132..170 CDD:293791 14/37 (38%)
WD40 repeat 175..213 CDD:293791 14/37 (38%)
WD40 repeat 220..299 CDD:293791 18/80 (23%)
WD40 repeat 266..321 CDD:293791 8/54 (15%)
WD40 repeat 326..365 CDD:293791 13/38 (34%)
WD40 repeat 373..408 CDD:293791 8/35 (23%)
WD40 repeat 414..438 CDD:293791 8/23 (35%)
AampNP_001177373.1 WD40 88..388 CDD:238121 96/335 (29%)
WD40 <91..432 CDD:225201 112/377 (30%)
WD40 repeat 97..134 CDD:293791 19/36 (53%)
WD40 repeat 139..177 CDD:293791 16/44 (36%)
WD40 repeat 178..215 CDD:293791 14/36 (39%)
WD40 repeat 220..256 CDD:293791 10/35 (29%)
WD40 repeat 266..302 CDD:293791 8/55 (15%)
WD40 repeat 309..354 CDD:293791 11/47 (23%)
WD40 repeat 363..399 CDD:293791 8/35 (23%)
WD40 391..429 CDD:197651 13/37 (35%)
WD40 repeat 405..429 CDD:293791 8/23 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847603
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0296
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H846
Inparanoid 1 1.050 203 1.000 Inparanoid score I3742
Isobase 1 0.950 - 0 Normalized mean entropy S3098
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003404
OrthoInspector 1 1.000 - - oto93877
orthoMCL 1 0.900 - - OOG6_100610
Panther 1 1.100 - - LDO PTHR19857
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1794
SonicParanoid 1 1.000 - - X3860
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.740

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