DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5114 and wdr-5.2

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_510394.1 Gene:wdr-5.2 / 181540 WormBaseID:WBGene00010572 Length:395 Species:Caenorhabditis elegans


Alignment Length:316 Identity:67/316 - (21%)
Similarity:108/316 - (34%) Gaps:112/316 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 DRERIAAITDEATV------------TFKKHTAPVFACSLHPNYNWAVTGSEDDRAFVWETSTGD 119
            |.:.|.:.:|:..|            |.|.||..||.|..:|:.....:||.|:...:|....|:
 Worm   159 DSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARNGN 223

  Fly   120 VLYEITEHKDTVTETHFSHDGVYLATGDLAGDLFVFKVSEKHDERPILTKIWEYSMSDMSWLFWH 184
            .::.|..|:|.|:...|:.||.|||:|...|                :.:||:.:          
 Worm   224 TIFSIPGHEDPVSSVCFNRDGAYLASGSYDG----------------IVRIWDST---------- 262

  Fly   185 RAAHILLAGSDSGEVFVFRIPSGEC--KILPGQSSRCESGELSGDGKKLFTAYVNGSVKLWDLKS 247
                                 :|.|  .::..:.......:.|.:||.:..:.:|.::||||.:.
 Worm   263 ---------------------TGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNTLKLWDYQK 306

  Fly   248 CQVLIDVNESHPMGFGEITHAVVACERESPFYVCAEASGECSSGKGIRYNTSFH-----NKTIRK 307
            .:||.:.. .|                |:..| |..|:...:.||.|...:..|     |...|:
 Worm   307 LRVLKEYT-GH----------------ENSKY-CVAANFSVTGGKWIVSGSEDHKVYIWNLQTRE 353

  Fly   308 ML----------FCTNNGPVSTIQSEHGIECLAFAPSSADLKLFACGSLDGRISIW 353
            :|          .||:..|...|     |...|..|             |.||.||
 Worm   354 ILQTLDGHNTAVMCTDCHPGQNI-----IASAALEP-------------DMRIKIW 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369 64/304 (21%)
WD40 <81..441 CDD:225201 63/290 (22%)
WD40 repeat 89..126 CDD:293791 10/36 (28%)
WD40 repeat 132..170 CDD:293791 8/37 (22%)
WD40 repeat 175..213 CDD:293791 2/39 (5%)
WD40 repeat 220..299 CDD:293791 18/78 (23%)
WD40 repeat 266..321 CDD:293791 14/69 (20%)
WD40 repeat 326..365 CDD:293791 8/28 (29%)
WD40 repeat 373..408 CDD:293791
WD40 repeat 414..438 CDD:293791
wdr-5.2NP_510394.1 WWbp <1..87 CDD:304964
WD40 <104..395 CDD:225201 67/316 (21%)
WD40 106..392 CDD:238121 67/316 (21%)
WD40 repeat 110..146 CDD:293791
WD40 repeat 152..188 CDD:293791 5/28 (18%)
WD40 repeat 193..229 CDD:293791 9/35 (26%)
WD40 repeat 236..271 CDD:293791 12/81 (15%)
WD40 repeat 278..314 CDD:293791 10/35 (29%)
WD40 repeat 322..359 CDD:293791 9/36 (25%)
WD40 repeat 365..391 CDD:293791 10/43 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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