| Sequence 1: | NP_001246760.1 | Gene: | CG5114 / 39624 | FlyBaseID: | FBgn0036460 | Length: | 445 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_499755.1 | Gene: | lis-1 / 176758 | WormBaseID: | WBGene00003047 | Length: | 404 | Species: | Caenorhabditis elegans |
| Alignment Length: | 453 | Identity: | 85/453 - (18%) |
|---|---|---|---|
| Similarity: | 151/453 - (33%) | Gaps: | 156/453 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 25 LEEQPLDEDD-----DDLEE--VTLEQLEARLAMAGGDDDEEEDEEELRDRERIAAITDE----- 77
Fly 78 ------ATVTFKKHTAPVFACSLHPNYNWAVTGSEDDRAFVWETSTGDVLYEITEHKDTVTETHF 136
Fly 137 SHDGVYLATGDLAGDLFVFKVSEKHDERPILTKIWEYSMSDMSWLFWHRAAHILLAGSDSGEVFV 201
Fly 202 FRIPSGEC-KILPGQSSRCESGELSGDGKKLFTAYVNGSVKLWDLKSCQVLIDVNESHPMGFGEI 265
Fly 266 THAVVACERESPFYVCAEASGECSSGKGIRYNTSFHNKTIRKMLFCTNNGPVSTIQSEHGIECLA 330
Fly 331 FAPSSADLKLFACGSLDGRISIWDYAKSALRTICENPVPNDAVIRIKWLND-------------- 381
Fly 382 --HTILAATSQGNLNAFDARTGILKFTLTGHYYHIYEFVYKPQENLLLTVSEDNTAKIFKVPA 442 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG5114 | NP_001246760.1 | WD40 | 79..439 | CDD:295369 | 69/376 (18%) |
| WD40 | <81..441 | CDD:225201 | 68/376 (18%) | ||
| WD40 repeat | 89..126 | CDD:293791 | 9/36 (25%) | ||
| WD40 repeat | 132..170 | CDD:293791 | 4/37 (11%) | ||
| WD40 repeat | 175..213 | CDD:293791 | 8/38 (21%) | ||
| WD40 repeat | 220..299 | CDD:293791 | 9/78 (12%) | ||
| WD40 repeat | 266..321 | CDD:293791 | 9/54 (17%) | ||
| WD40 repeat | 326..365 | CDD:293791 | 8/38 (21%) | ||
| WD40 repeat | 373..408 | CDD:293791 | 9/50 (18%) | ||
| WD40 repeat | 414..438 | CDD:293791 | 5/23 (22%) | ||
| lis-1 | NP_499755.1 | LisH | 7..39 | CDD:128913 | 3/6 (50%) |
| WD40 | 98..402 | CDD:238121 | 70/382 (18%) | ||
| WD40 | <100..404 | CDD:225201 | 69/380 (18%) | ||
| WD40 repeat | 109..146 | CDD:293791 | 9/36 (25%) | ||
| WD40 repeat | 152..189 | CDD:293791 | 13/82 (16%) | ||
| WD40 repeat | 194..230 | CDD:293791 | 9/79 (11%) | ||
| WD40 repeat | 237..272 | CDD:293791 | 12/58 (21%) | ||
| WD40 repeat | 278..329 | CDD:293791 | 9/50 (18%) | ||
| WD40 repeat | 335..371 | CDD:293791 | 6/29 (21%) | ||
| WD40 repeat | 377..401 | CDD:293791 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG53955 | |
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.010 | |||||