DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5114 and wdr86

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_002932539.2 Gene:wdr86 / 100486668 XenbaseID:XB-GENE-981853 Length:415 Species:Xenopus tropicalis


Alignment Length:385 Identity:80/385 - (20%)
Similarity:137/385 - (35%) Gaps:79/385 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 HTAPVFACSLHPNYNWAVTGSEDDRAFVWETSTGDVLYEITEHKDTVTETHFSHDGVYLATGDLA 149
            |...:...||.|:....:|.|||..|.:|.||.......:..|...:|..|..::..:..:.|..
 Frog    36 HKGGINWMSLSPDGCHLLTASEDCTARLWRTSDNQCCNVLLGHSSYITFCHLENEAAFTCSADQT 100

  Fly   150 GDLFVFKVSEKHDERPILTKIWEYSMSDMSWLFWHRAA---HILLAGSDSGEVFVFRIPSGECKI 211
                              .:.||.|..:...::....:   .||:|   .|.:|     ||..  
 Frog   101 ------------------VRKWEVSSGECVMVYTGHTSIVNRILVA---KGYIF-----SGSY-- 137

  Fly   212 LPGQSSRCESGELSGDGKKLFTAYVNGSVKLWDLKSCQVL--IDVNESHPMGFGEITHAVVACER 274
              .:::|..:.: ||...:.|..:.|..:.|....|..||  :||.|.      |:...:|....
 Frog   138 --DRTARSWNAD-SGQSLQEFRGHRNCVLTLAHFSSYDVLEALDVEEK------EVKEFLVTGST 193

  Fly   275 ESPFYVCAEASGEC----------------SSGKGIRYNTSFHNKTIRKMLFCTNNGPVSTIQSE 323
            :....:...:||.|                .:..|..|:.|. :.|||:....|  |...|:...
 Frog   194 DCTIKIWEASSGCCYQTLRGHVGAILCVVLDTSNGELYSGSM-DCTIRRWNMVT--GDQLTVFRH 255

  Fly   324 H--GIECLAFAPSSADLKLFACGSLDGRISIW-DYAKSALRTICENPVPNDAVIRIKWLNDHTIL 385
            |  .:.||....     :|...||:|..:..| ......:||.   .....:|..:|:   |..:
 Frog   256 HQGSVICLEIVG-----RLLYSGSVDRTVKCWLTDTGDCVRTY---KTHKHSVSTLKY---HAGI 309

  Fly   386 AATSQGN--LNAFDARTGILKFTLTGHYYHIYEFVYKPQENLLLTVSEDNTAKIFKVPAL 443
            ..|..|:  ..||:.::|.|:....||.:.|.  ..:..:|.|.|.|.|...:::.:..|
 Frog   310 LFTGSGDACARAFNTKSGTLQRVFQGHSFIIN--CIQIHDNSLYTASHDGALRVWDIKDL 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369 79/379 (21%)
WD40 <81..441 CDD:225201 79/381 (21%)
WD40 repeat 89..126 CDD:293791 11/36 (31%)
WD40 repeat 132..170 CDD:293791 3/37 (8%)
WD40 repeat 175..213 CDD:293791 7/40 (18%)
WD40 repeat 220..299 CDD:293791 18/96 (19%)
WD40 repeat 266..321 CDD:293791 13/70 (19%)
WD40 repeat 326..365 CDD:293791 9/39 (23%)
WD40 repeat 373..408 CDD:293791 9/36 (25%)
WD40 repeat 414..438 CDD:293791 6/23 (26%)
wdr86XP_002932539.2 WD40 29..320 CDD:238121 67/334 (20%)
WD40 repeat 41..77 CDD:293791 11/35 (31%)
WD40 repeat 123..157 CDD:293791 11/46 (24%)
WD40 repeat 162..212 CDD:293791 12/55 (22%)
WD40 repeat 219..254 CDD:293791 9/37 (24%)
WD40 repeat 260..294 CDD:293791 9/41 (22%)
WD40 repeat 300..333 CDD:293791 9/35 (26%)
WD40 326..363 CDD:197651 10/38 (26%)
WD40 repeat 340..362 CDD:293791 6/23 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.