DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5114 and aamp

DIOPT Version :9

Sequence 1:NP_001246760.1 Gene:CG5114 / 39624 FlyBaseID:FBgn0036460 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001096285.1 Gene:aamp / 100124854 XenbaseID:XB-GENE-1010095 Length:443 Species:Xenopus tropicalis


Alignment Length:442 Identity:140/442 - (31%)
Similarity:220/442 - (49%) Gaps:52/442 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DDELQEIIELEEQPLDEDD--DDLEEVTLEQLEARLAMAGGDDDEEEDE--EELRDRERIAAITD 76
            |:|:.|::||.:...|.||  .|:|:|..........||..::.|.|||  ||..|..      |
 Frog    32 DEEIIEVLELNDVEPDPDDLASDMEDVDFADDPEDGEMADNEEWETEDEGVEEGTDPH------D 90

  Fly    77 EATVTFKKHTAPVFACSLHPNYN-WAVTGSEDDRAFVWETSTGDVLYEITEHKDTVTETHFSHDG 140
            ::.:||.||||.||..||.|..: .||||.|||:|::|..|.|:.::|.|.|||:||...||||.
 Frog    91 DSELTFSKHTASVFCVSLDPKESALAVTGGEDDKAYIWRLSDGETVFECTGHKDSVTCAVFSHDS 155

  Fly   141 VYLATGDLAGDLFVFKVSEKHDERPILTKIWEYSMSDMSWLFWHRAAHILLAGSDSGEVFVFRIP 205
            ..:||||::|.:.|:||....:       ||.:.:.|:.||.||..||:||||:..|..::::||
 Frog   156 TMVATGDMSGLIKVWKVEGAEE-------IWSFEVGDLEWLEWHPCAHVLLAGTADGNTWMWKIP 213

  Fly   206 SGECKILPGQSSRCESGELSGDGKKLFTAYVNGSVKLWDLKSCQVLIDVNESHPMGFGEITHAVV 270
            |||||...|.|.....|:...||:|....|.:|||::||||.               |...|.:.
 Frog   214 SGECKTFQGPSCPATCGQFLPDGRKAVVGYEDGSVRIWDLKQ---------------GNALHVLK 263

  Fly   271 ACERESPFYVCAEASGECS---SGKGIRYNTSFHNKTIRKM--LFCTNNGPVSTIQSEHG----- 325
            ..:..:....|..::.:.|   :| .:..:|...|....|:  :|.|.:......:.|.|     
 Frog   264 GTDGHAGPLTCVASNNDGSLVLTG-SVDCDTKLVNTATGKVVGVFKTESNVSKASRREDGEAESN 327

  Fly   326 -IECLAFAPSSADLKLFACGSLDGRISIWDYAKSALRTICENPVPNDAVIRIKW-LNDHTILAAT 388
             :|.|.|...   |.|.|.|.|||.::::|.:..:||..|::   ...::::.| .|...:...:
 Frog   328 SVESLGFCNV---LPLAAVGYLDGTLAVYDLSSQSLRHRCQH---ESGIVQLLWEQNSPVVYTCS 386

  Fly   389 SQGNLNAFDARTGILKFTLTGHYYHIYEFVYKPQENLLLTVSEDNTAKIFKV 440
            ..|.:..:|:|:|.:.....||...|.:|......::::|.|.|:.||:|.|
 Frog   387 LDGAVRLWDSRSGKMISEYCGHTAEILDFALNKDASIVVTASGDHQAKVFCV 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5114NP_001246760.1 WD40 79..439 CDD:295369 117/372 (31%)
WD40 <81..441 CDD:225201 119/373 (32%)
WD40 repeat 89..126 CDD:293791 17/37 (46%)
WD40 repeat 132..170 CDD:293791 13/37 (35%)
WD40 repeat 175..213 CDD:293791 19/37 (51%)
WD40 repeat 220..299 CDD:293791 17/81 (21%)
WD40 repeat 266..321 CDD:293791 9/59 (15%)
WD40 repeat 326..365 CDD:293791 13/38 (34%)
WD40 repeat 373..408 CDD:293791 6/35 (17%)
WD40 repeat 414..438 CDD:293791 7/23 (30%)
aampNP_001096285.1 WD40 95..395 CDD:238121 105/328 (32%)
WD40 repeat 103..141 CDD:293791 17/37 (46%)
WD40 repeat 183..221 CDD:293791 19/37 (51%)
WD40 repeat 228..265 CDD:293791 14/51 (27%)
WD40 repeat 272..321 CDD:293791 8/49 (16%)
WD40 repeat 329..365 CDD:293791 13/38 (34%)
WD40 repeat 370..394 CDD:293791 3/23 (13%)
WD40 398..436 CDD:197651 10/37 (27%)
WD40 repeat 412..436 CDD:293791 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H846
Inparanoid 1 1.050 212 1.000 Inparanoid score I3560
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1025450at2759
OrthoFinder 1 1.000 - - FOG0003404
OrthoInspector 1 1.000 - - oto104101
Panther 1 1.100 - - LDO PTHR19857
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1794
SonicParanoid 1 1.000 - - X3860
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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