DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3349 and Pccb

DIOPT Version :10

Sequence 1:NP_648730.2 Gene:CG3349 / 39623 FlyBaseID:FBgn0036459 Length:766 Species:Drosophila melanogaster
Sequence 2:XP_063120991.1 Gene:Pccb / 24624 RGDID:3265 Length:565 Species:Rattus norvegicus


Alignment Length:362 Identity:73/362 - (20%)
Similarity:130/362 - (35%) Gaps:99/362 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 RDRLEIINDGIDFLEELQGIE-----------------SSLVTNYTDVNTDLFHLKERVENFSNL 294
            |:|:.::.|...|:|....:|                 .|:||....:|..|.::      ||..
  Rat    69 RERISLLLDPGSFVESDMFVEHRCADFGMAAEKNKFPGDSVVTGRGRINGRLVYV------FSQD 127

  Fly   295 IQSEGGNYS---TGKCCPNILSELETFRNDFADNLKFEGTTTLKLDHQPYIQKEKSLREMILSYV 356
            ....||:.|   ..|.| .|:.:..|.           |...:.|:.....:    ::|.:.|..
  Rat   128 FTVFGGSLSGAHAQKIC-KIMDQAITV-----------GAPVIGLNDSGGAR----IQEGVESLA 176

  Fly   357 GDIDLLETSLMNQTKKSTY---------CEGEQTQIKNLEQIINDIRPEKFL----GELLKQIEP 408
            |..|:.   |.|.|.....         |.|.......|......::...:|    .|::|.:  
  Rat   177 GYADIF---LRNVTASGVIPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPEVVKSV-- 236

  Fly   409 LNENL-------AEANKTIS---------DAEKLLNL-EKENLQKLNSLYG---EEWHQKN--IL 451
            .||::       |:.:.|:|         |.:.|.|| |..|...|::...   .|.|..:  ::
  Rat   237 TNEDVTQEQLGGAKTHTTVSGVAHRAFDNDVDALCNLREFFNFLPLSNQDPAPIRECHDPSDRLV 301

  Fly   452 KDLESKVSQLEYKINNLSLLEDVNWPKLRKSVDDVNKMFENSPSFFANITV-ISMKNG--MKFKG 513
            .:|::.|.....|..|  :|:.::      :|.|..:.||..|::..||.: .:..||  :...|
  Rat   302 PELDTVVPLESSKAYN--MLDIIH------AVIDEREFFEIMPNYAKNIVIGFARMNGRTVGIVG 358

  Fly   514 QSTS------DFAINLKKKSEVRFCTNESIKLNDYLE 544
            ...:      |...::|....||||...||.|..:::
  Rat   359 NQPNVASGCLDINSSVKGARFVRFCDAFSIPLITFVD 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3349NP_648730.2 PRK03918 349..>766 CDD:235175 51/240 (21%)
PccbXP_063120991.1 None

Return to query results.
Submit another query.